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13_1_40cm_4_scaffold_229

Search features with annotation key words

Displaying items 1-30 of 36 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_229_1
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1..387)
DNA (387bp) protein (129aa)
Phosphate transporter n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CJ33_PSEUX
phosphate transporter
Phosphate transporter {ECO:0000313|EMBL:AEA23525.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (stra
13_1_40cm_4_scaffold_229_2
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

827..1594
DNA (768bp) protein (256aa)
Tax=RBG_16_Euryarchaeota_68_13_curated
13_1_40cm_4_scaffold_229_3
unknown

Not on your lists

1877..2473
DNA (597bp) protein (199aa)

This feature has no annotations

13_1_40cm_4_scaffold_229_4
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(2516..4000)
DNA (1485bp) protein (495aa)
Putative gas vesicle protein GvpD n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IL09_NITGG
gvpD; gas vesicle protein GvpD
Putative gas vesicle protein GvpD {ECO:0000313|EMBL:AFU59242.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitro
13_1_40cm_4_scaffold_229_5
unknown

Not on your lists

comp(4175..4660)
DNA (486bp) protein (162aa)

This feature has no annotations

13_1_40cm_4_scaffold_229_6
RBG_16_Bathyarchaeota_57_9_curated, Bathyarchaeota, Archaea

Not on your lists

comp(4744..5451)
DNA (708bp) protein (236aa)
Methyltransferase type 11 n=1 Tax=uncultured marine crenarchaeote E37-7F RepID=G9BAQ8_9CREN
hypothetical protein Tax=RBG_16_Bathyarchaeota_57_9_curated
type 11 methyltransferase
13_1_40cm_4_scaffold_229_7
RBG_16_Aminicenantes_63_16_curated, Aminicenantes, Bacteria

Not on your lists

5763..6149
DNA (387bp) protein (129aa)
hypothetical protein Tax=RBG_16_Aminicenantes_63_16_curated
Uncharacterized protein id=4169658 bin=GWA2_Ignavibacteria_55_11 species=unknown genus=Brevibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
hypothetical protein
13_1_40cm_4_scaffold_229_8
Leptospira fainei, Leptospira, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

6167..6361
DNA (195bp) protein (65aa)
Riboflavin biosynthesis protein RibD C-terminal domain protein n=1 Tax=Leptospira fainei serovar Hurstbridge str. BUT 6 RepID=S3UTA9_9LEPT
Riboflavin biosynthesis protein RibD C-terminal domain protein {ECO:0000313|EMBL:EPG72503.1}; TaxID=1193011 species="Bacteria; Spirochaetes; Leptospirales; Leptospiraceae; Leptospira.;" source="Leptos
13_1_40cm_4_scaffold_229_9
RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(6959..8614)
DNA (1656bp) protein (552aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4Y0T8_SORCE
PAS/PAC sensor signal transduction histidine kinase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated
hypothetical protein
13_1_40cm_4_scaffold_229_10
unknown

Not on your lists

comp(8682..8924)
DNA (243bp) protein (81aa)

This feature has no annotations

13_1_40cm_4_scaffold_229_11
Candidatus Micrarchaeum acidiphilum, Candidatus Micrarchaeum, Parvarchaeota, Archaea

Not on your lists

9683..10039
DNA (357bp) protein (119aa)
LBCA THIOREDOXIN n=1 Tax=synthetic construct RepID=UPI00038A5F74
Thioredoxin {ECO:0000313|EMBL:EET89583.1}; TaxID=425595 species="Archaea; Parvarchaeota; Candidatus Micrarchaeum.;" source="Candidatus Micrarchaeum acidiphilum ARMAN-2.;"
Thioredoxin
13_1_40cm_4_scaffold_229_12
RBG_13_Chloroflexi_50_21_curated, Chloroflexi, Bacteria

Not on your lists

comp(10765..11661)
DNA (897bp) protein (299aa)
Uncharacterized protein n=1 Tax=Leptospirillum ferrooxidans (strain C2-3) RepID=I0INN2_LEPFC
hypothetical protein Tax=RBG_13_Chloroflexi_50_21_curated
hypothetical protein
13_1_40cm_4_scaffold_229_13
Methanobacterium paludis, Methanobacterium, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

11769..12152
DNA (384bp) protein (128aa)
Transcriptional regulator NikR, CopG family n=1 Tax=Methanobacterium sp. (strain SWAN-1) RepID=F6D597_METSW
CopG family transcriptional regulator
Transcriptional regulator NikR, CopG family {ECO:0000313|EMBL:AEG18205.1}; TaxID=868131 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobacterium.;" s
13_1_40cm_4_scaffold_229_14
Thermomicrobium roseum, Thermomicrobium, Thermomicrobiales, Thermomicrobia, Chloroflexi, Bacteria

Not on your lists

comp(12308..14320)
DNA (2013bp) protein (671aa)
Putative transport protein n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9KYE7_THERP
Putative transport protein {ECO:0000313|EMBL:ACM04777.1}; TaxID=309801 species="Bacteria; Chloroflexi; Thermomicrobiales; Thermomicrobiaceae; Thermomicrobium.;" source="Thermomicrobium roseum (strain
putative transport protein
13_1_40cm_4_scaffold_229_15

Not on your lists

14482..14694
DNA (213bp) protein (71aa)
Methyltransferase type 11 {ECO:0000313|EMBL:EQD53692.1}; EC=2.1.1.- {ECO:0000313|EMBL:EQD53692.1};; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine dr
13_1_40cm_4_scaffold_229_16

Not on your lists

14833..15492
DNA (660bp) protein (220aa)
Methyltransferase type 11 {ECO:0000313|EMBL:EQD53692.1}; EC=2.1.1.- {ECO:0000313|EMBL:EQD53692.1};; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine dr
Methyltransferase type 11 n=1 Tax=mine drainage metagenome RepID=T1A9J9_9ZZZZ
type 11 methyltransferase
13_1_40cm_4_scaffold_229_17
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

15694..16482
DNA (789bp) protein (263aa)
3-oxoacyl-[acyl-carrier protein] reductase n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9PH13_9DELT
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:AHG88527.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_4_scaffold_229_18
Archaeoglobus veneficus, Archaeoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

Not on your lists

17266..17619
DNA (354bp) protein (118aa)
RecA-superfamily ATPase implicated in signal transduction {ECO:0000313|EMBL:AEA47630.1}; TaxID=693661 species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Archaeoglobus.;"
RecA-superfamily ATPase implicated in signal transduction
13_1_40cm_4_scaffold_229_19
unknown

Not on your lists

17644..18354
DNA (711bp) protein (237aa)

This feature has no annotations

13_1_40cm_4_scaffold_229_20
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

comp(19001..19768)
DNA (768bp) protein (256aa)
Hypothetical conserved protein n=1 Tax=uncultured crenarchaeote RepID=H5SJ42_9CREN
hypothetical protein Tax=RBG_16_Archaea_50_20_curated
KaiC protein
13_1_40cm_4_scaffold_229_21
Cupriavidus necator, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19838..20572)
DNA (735bp) protein (245aa)
PE-PGRS family protein n=1 Tax=Cupriavidus necator (strain ATCC 43291 / DSM 13513 / N-1) RepID=F8GYH4_CUPNN
PE-PGRS family protein
PE-PGRS family protein {ECO:0000313|EMBL:AEI82915.1}; TaxID=1042878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus necator
13_1_40cm_4_scaffold_229_22
unknown

Not on your lists

20793..21074
DNA (282bp) protein (94aa)

This feature has no annotations

13_1_40cm_4_scaffold_229_23
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

Not on your lists

comp(21141..21659)
DNA (519bp) protein (173aa)
hypothetical protein
Tax=RBG_16_Thaumarchaeota_49_8_curated
13_1_40cm_4_scaffold_229_24
GWC2_OP11_40_7_plus, Levybacteria, Microgenomates, Bacteria

Not on your lists

21757..22440
DNA (684bp) protein (228aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrosopumilus salaria BD31 RepID=I3D4Z3_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:KKR73766.1}; TaxID=1618468 species="Bacteria; Microgenomates.;" source="Microgenomates (Levybacteria) bacterium GW2011_GWC2_40_7.;"
hypothetical protein
13_1_40cm_4_scaffold_229_25
uncultured crenarchaeote 57a5, Crenarchaeota, Archaea

Not on your lists

comp(22554..24134)
DNA (1581bp) protein (527aa)
Nitroreductase related protein n=1 Tax=uncultured crenarchaeote 57a5 RepID=D4N734_9CREN
Nitroreductase related protein {ECO:0000313|EMBL:ACY24520.1}; TaxID=684058 species="Archaea; Crenarchaeota; environmental samples.;" source="uncultured crenarchaeote 57a5.;"
hypothetical protein
13_1_40cm_4_scaffold_229_26
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

Not on your lists

comp(24170..24793)
DNA (624bp) protein (208aa)
Phosphate-specific transport system accessory protein PhoU n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0I9B5_NITGG
phosphate uptake regulator, PhoU Tax=RBG_16_Thaumarchaeota_49_8_curated
phosphate uptake regulator, PhoU
13_1_40cm_4_scaffold_229_27
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

Not on your lists

comp(24820..25644)
DNA (825bp) protein (275aa)
pstB; ABC phosphate uptake transporter, ATP-binding protein (EC:3.6.3.27) Tax=RBG_16_Thaumarchaeota_49_8_curated
pstB; ABC phosphate uptake transporter, ATP-binding protein (EC:3.6.3.27)
ABC phosphate uptake transporter, ATP-binding protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IMI6_NITGG
13_1_40cm_4_scaffold_229_28
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

Not on your lists

comp(25647..26498)
DNA (852bp) protein (284aa)
Phosphate transport system permease protein pstA n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6AQS3_9ARCH
Phosphate transport system permease protein pstA {ECO:0000313|EMBL:CDI04987.1}; TaxID=1407055 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
pstA; Phosphate transport system permease protein PstA
13_1_40cm_4_scaffold_229_29
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(26502..27380)
DNA (879bp) protein (293aa)
ABC phosphate uptake transporter, substrate-binding protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IIL0_NITGG
pstS1; ABC phosphate uptake transporter, substrate-binding protein
ABC phosphate uptake transporter, substrate-binding protein {ECO:0000313|EMBL:AFU57922.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitro
13_1_40cm_4_scaffold_229_30
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(27616..28767)
DNA (1152bp) protein (384aa)
Phosphate ABC transporter, periplasmic phosphate-binding protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ILL2_NITGG
pstC; phosphate ABC transporter substrate-binding protein
Phosphate ABC transporter, periplasmic phosphate-binding protein {ECO:0000313|EMBL:AFU60488.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae;
Displaying items 1-30 of 36 in total

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