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13_1_40cm_4_scaffold_233

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_233_1
RBG_16_Archaea_50_20_curated, Archaea

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2..2260
DNA (2259bp) protein (753aa)
anaerobic ribonucleoside-triphosphate reductase (EC:1.17.4.2); K00527 ribonucleoside-triphosphate reductase [EC:1.17.4.2] Tax=RBG_16_Archaea_50_20_curated
anaerobic ribonucleoside-triphosphate reductase (EC:1.17.4.2)
Anaerobic ribonucleoside-triphosphate reductase n=1 Tax=Methanocaldococcus villosus KIN24-T80 RepID=N6UWF6_9EURY
13_1_40cm_4_scaffold_233_2
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

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2331..3623
DNA (1293bp) protein (431aa)
Sodium/hydrogen exchanger n=4 Tax=Pelosinus fermentans RepID=I8RFY3_9FIRM
sodium/hydrogen exchanger Tax=RBG_16_Thaumarchaeota_49_8_curated
sodium/hydrogen exchanger
13_1_40cm_4_scaffold_233_3
RBG_16_Archaea_50_20_curated, Archaea

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comp(3658..4587)
DNA (930bp) protein (310aa)
aspartate carbamoyltransferase catalytic subunit; K00609 aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] Tax=RBG_16_Archaea_50_20_curated
aspartate carbamoyltransferase n=1 Tax=Thermococcus zilligii RepID=UPI00029A3195
aspartate carbamoyltransferase catalytic subunit
13_1_40cm_4_scaffold_233_4
unknown

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4656..5012
DNA (357bp) protein (119aa)

This feature has no annotations

13_1_40cm_4_scaffold_233_5
unknown

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5009..5473
DNA (465bp) protein (155aa)

This feature has no annotations

13_1_40cm_4_scaffold_233_6
unknown

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5563..6015
DNA (453bp) protein (151aa)

This feature has no annotations

13_1_40cm_4_scaffold_233_7
unknown

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comp(6118..6432)
DNA (315bp) protein (105aa)

This feature has no annotations

13_1_40cm_4_scaffold_233_8
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

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comp(6973..8487)
DNA (1515bp) protein (505aa)
DNA polymerase II small subunit; K02323 DNA polymerase II small subunit [EC:2.7.7.7] Tax=RBG_16_Bathyarchaeota_48_13_curated
polB1; DNA polymerase II small subunit (EC:2.7.7.7)
DNA polymerase II small subunit n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IGL6_NITGG
13_1_40cm_4_scaffold_233_9
RBG_16_Archaea_50_20_curated, Archaea

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comp(8555..9523)
DNA (969bp) protein (323aa)
Phosphate uptake regulator, PhoU n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6AVU5_9ARCH
putative phosphate transport system protein Tax=RBG_16_Archaea_50_20_curated
phosphate uptake regulator
13_1_40cm_4_scaffold_233_10
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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comp(9583..10716)
DNA (1134bp) protein (378aa)
GTPase HflX n=1 Tax=Thermococcus sibiricus (strain MM 739 / DSM 12597) RepID=C6A385_THESM
GTP-binding proten HflX; K03665 GTP-binding protein HflX Tax=RBG_13_Bathyarchaeota_38_9_curated
HflX-related GTP-binding protein
13_1_40cm_4_scaffold_233_11
RBG_16_Archaea_50_20_curated, Archaea

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comp(10784..11104)
DNA (321bp) protein (107aa)
Vacuolar H+transporting two-sector ATPase F subunit; K02122 V-type H+-transporting ATPase subunit F [EC:3.6.3.14] Tax=RBG_16_Archaea_50_20_curated
V-type ATP synthase subunit F n=1 Tax=Methanocaldococcus fervens (strain DSM 4213 / JCM 157852 / AG86) RepID=C7P6V6_METFA
V-type ATP synthase subunit F
13_1_40cm_4_scaffold_233_12

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comp(11114..11800)
DNA (687bp) protein (229aa)
DNA-(apurinic or apyrimidinic site) lyase (EC:4.2.99.18); K03653 N-glycosylase/DNA lyase [EC:3.2.2.- 4.2.99.18] id=5040692 bin=GW2011_AR5 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=GW2011_AR5 organism_group=Archaea organism_desc=gwa2_.48_18 Replace with curated version!
DNA-(apurinic or apyrimidinic site) lyase (EC:4.2.99.18)
Thermostable 8-oxoguanine DNA glycosylase {ECO:0000313|EMBL:KHO47804.1}; TaxID=1579367 species="Archaea.;" source="archaeon GW2011_AR5.;"
13_1_40cm_4_scaffold_233_13
RBG_16_Archaea_50_20_curated, Archaea

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comp(11781..12239)
DNA (459bp) protein (153aa)
Aspartate carbamoyltransferase regulatory chain n=1 Tax=Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 / SANAE) RepID=D1Z301_METPS
aspartate carbamoyltransferase, regulatory subunit; K00610 aspartate carbamoyltransferase regulatory subunit Tax=RBG_16_Archaea_50_20_curated
pyrI; aspartate carbamoyltransferase regulatory chain
13_1_40cm_4_scaffold_233_14

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12320..12739
DNA (420bp) protein (140aa)
Putative uncharacterized protein n=1 Tax=uncultured archaeon RepID=D1JBZ9_9ARCH
Putative uncharacterized protein {ECO:0000313|EMBL:CBH39629.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
hypothetical protein
13_1_40cm_4_scaffold_233_15
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

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13141..14295
DNA (1155bp) protein (385aa)
hypothetical protein n=1 Tax=Aigarchaeota archaeon SCGC AAA471-A16 RepID=UPI00036CE438
cdc6; cell division control protein 6; K10725 archaeal cell division control protein 6 Tax=RBG_16_Bathyarchaeota_48_13_curated
cell division control protein Cdc6
13_1_40cm_4_scaffold_233_16
RBG_13_Bathyarchaeota_52_12_curated, Bathyarchaeota, Archaea

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14258..14854
DNA (597bp) protein (199aa)
UPF0215 protein MTH_1316 n=1 Tax=Methanothermobacter thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H) RepID=Y1316_METTH
hypothetical protein; K09120 hypothetical protein Tax=RBG_13_Bathyarchaeota_52_12_curated
hypothetical protein
13_1_40cm_4_scaffold_233_17
unknown

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14945..15130
DNA (186bp) protein (62aa)

This feature has no annotations

13_1_40cm_4_scaffold_233_18
unknown

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15127..15363
DNA (237bp) protein (79aa)

This feature has no annotations

13_1_40cm_4_scaffold_233_19
unknown

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comp(15889..17007)
DNA (1119bp) protein (373aa)

This feature has no annotations

13_1_40cm_4_scaffold_233_20
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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17247..17672
DNA (426bp) protein (142aa)
Marine sediment metagenome DNA, contig: S01H4_S10156 Tax=RBG_13_Bathyarchaeota_46_16b_curated
13_1_40cm_4_scaffold_233_21
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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17944..18606
DNA (663bp) protein (221aa)
hypothetical protein Tax=RBG_13_Bathyarchaeota_46_16b_curated
hypothetical protein
hypothetical protein id=14428103 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
13_1_40cm_4_scaffold_233_22
unknown

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comp(18705..18971)
DNA (267bp) protein (89aa)

This feature has no annotations

Displaying 22 items

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