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13_1_40cm_4_scaffold_3067

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_3067_1
unknown

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3..89
DNA (87bp) protein (29aa)

This feature has no annotations

13_1_40cm_4_scaffold_3067_2
unknown

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comp(200..1744)
DNA (1545bp) protein (515aa)

This feature has no annotations

13_1_40cm_4_scaffold_3067_3
Pyrococcus yayanosii, Pyrococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

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comp(1741..2496)
DNA (756bp) protein (252aa)
ABC transporter, ATP-binding protein, putative n=1 Tax=Pyrococcus yayanosii (strain CH1 / JCM 16557) RepID=F8AFC9_PYRYC
ABC transporter ATP-binding protein
ABC transporter, ATP-binding protein, putative {ECO:0000313|EMBL:AEH23736.1}; TaxID=529709 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Pyrococcus.;" source="Pyrococc
13_1_40cm_4_scaffold_3067_4
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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2662..3933
DNA (1272bp) protein (424aa)
putative dGTPase (EC:3.1.5.1)
hypothetical protein n=1 Tax=crenarchaeote SCGC AAA261-N23 RepID=UPI0003621E1D
metal dependent phosphohydrolase Tax=RBG_13_Bathyarchaeota_46_16b_curated
13_1_40cm_4_scaffold_3067_5
Candidatus Nitrosopumilus sp. D3C, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

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4024..4236
DNA (213bp) protein (71aa)
Uncharacterized protein {ECO:0000313|EMBL:AJM92599.1}; TaxID=1582439 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Candidatus Nitrosopumilus sp. D3C.
13_1_40cm_4_scaffold_3067_6
RBG_16_Archaea_50_20_curated, Archaea

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comp(4591..4914)
DNA (324bp) protein (108aa)
Tax=RBG_16_Archaea_50_20_curated
13_1_40cm_4_scaffold_3067_7
Candidatus Korarchaeum cryptofilum, Candidatus Korarchaeum, Korarchaeota, Archaea

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comp(4938..5720)
DNA (783bp) protein (261aa)
Uncharacterized protein n=1 Tax=Korarchaeum cryptofilum (strain OPF8) RepID=B1L688_KORCO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACB07967.1}; TaxID=374847 species="Archaea; Korarchaeota; Candidatus Korarchaeum.;" source="Korarchaeum cryptofilum (strain OPF8).;"
13_1_40cm_4_scaffold_3067_8
Sulfolobus solfataricus, Sulfolobus, Sulfolobales, Thermoprotei, Crenarchaeota, Archaea

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5823..6293
DNA (471bp) protein (157aa)
Ribosomal protein L11 methyltransferase, putative n=3 Tax=Sulfolobus solfataricus RepID=D0KSX0_SULS9
ribosomal protein L11 methyltransferase, putative
50S ribosomal protein L11 methyltransferase {ECO:0000313|EMBL:AKA73902.1}; Putative uncharacterized protein ORF-c21_045 {ECO:0000313|EMBL:CAB57745.1}; TaxID=2287 species="Archaea; Crenarchaeota; Therm
13_1_40cm_4_scaffold_3067_9
RBG_16_Archaea_50_20_curated, Archaea

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comp(6285..7397)
DNA (1113bp) protein (371aa)
Uncharacterized protein n=1 Tax=Thermoproteus uzoniensis (strain 768-20) RepID=F2L4Q8_THEU7
GTPase or GTP-binding protein; K06947 Tax=RBG_16_Archaea_50_20_curated
hypothetical protein
13_1_40cm_4_scaffold_3067_10
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

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7601..8281
DNA (681bp) protein (227aa)
DNA repair and recombination protein RadB n=1 Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7E605_METEZ
DNA repair and recombination protein RadB Tax=RBG_16_Bathyarchaeota_48_13_curated
DNA repair and recombination protein RadB
13_1_40cm_4_scaffold_3067_11
RBG_16_Archaea_50_20_curated, Archaea

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8588..8839
DNA (252bp) protein (84aa)
UPF0290 protein Mefer_0314 n=1 Tax=Methanocaldococcus fervens (strain DSM 4213 / JCM 157852 / AG86) RepID=C7P6G8_METFA
hypothetical protein Tax=RBG_16_Archaea_50_20_curated
hypothetical protein
13_1_40cm_4_scaffold_3067_12
R_Acidobacteria_67_28, Acidobacteria, Bacteria

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8905..10326
DNA (1422bp) protein (474aa)
Peptidase U62, modulator of DNA gyrase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IK33_KORVE
peptidase U62, modulator of DNA gyrase; K03568 TldD protein Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
C69 family peptidase
13_1_40cm_4_scaffold_3067_13
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

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10329..11729
DNA (1401bp) protein (467aa)
Peptidase U62, modulator of DNA gyrase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IK34_KORVE
peptidase U62, modulator of DNA gyrase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
C69 family peptidase
13_1_40cm_4_scaffold_3067_14

Not on your lists

comp(12301..13443)
DNA (1143bp) protein (381aa)
Cystathionine gamma-lyase id=1251255 bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
Cystathionine gamma-lyase {ECO:0000313|EMBL:EQB64118.1}; TaxID=1379698 species="Bacteria.;" source="candidate division Zixibacteria bacterium RBG-1.;"
cystathionine gamma-lyase
13_1_40cm_4_scaffold_3067_15
unknown

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comp(14076..14534)
DNA (459bp) protein (153aa)

This feature has no annotations

13_1_40cm_4_scaffold_3067_16
unknown

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comp(14694..15263)
DNA (570bp) protein (190aa)

This feature has no annotations

13_1_40cm_4_scaffold_3067_17
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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15347..16432
DNA (1086bp) protein (362aa)
pfkB family carbohydrate kinase (EC:2.7.1.-)
Sugar kinase, ribokinase n=1 Tax=Thermoplasmatales archaeon SCGC AB-540-F20 RepID=M7T9G8_9EURY
Sugar kinase, ribokinase {ECO:0000313|EMBL:KCZ73245.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;"
13_1_40cm_4_scaffold_3067_18
Candidatus Parvarchaeum acidiphilum, Candidatus Parvarchaeum, Parvarchaeota, Archaea

Not on your lists

16533..17321
DNA (789bp) protein (263aa)
Beta-lactamase domain protein n=2 Tax=Candidatus Parvarchaeum acidiphilum RepID=D2EE80_9EURY
Beta-lactamase domain {ECO:0000313|EMBL:EGD71824.1}; TaxID=994837 species="Archaea; Parvarchaeota; Candidatus Parvarchaeum.;" source="Candidatus Parvarchaeum acidiphilum ARMAN-4_'5-way FS'.;"
bla; beta-lactamase
13_1_40cm_4_scaffold_3067_19
Pyrobaculum islandicum, Pyrobaculum, Thermoproteales, Thermoprotei, Crenarchaeota, Archaea

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comp(17370..18005)
DNA (636bp) protein (212aa)
Superoxide dismutase {ECO:0000256|RuleBase:RU000414}; EC=1.15.1.1 {ECO:0000256|RuleBase:RU000414};; TaxID=384616 species="Archaea; Crenarchaeota; Thermoprotei; Thermoproteales; Thermoproteaceae; Pyrob
Superoxide dismutase n=1 Tax=Pyrobaculum islandicum (strain DSM 4184 / JCM 9189) RepID=A1RW25_PYRIL
superoxide dismutase
13_1_40cm_4_scaffold_3067_20
unknown

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18111..18641
DNA (531bp) protein (177aa)

This feature has no annotations

13_1_40cm_4_scaffold_3067_21

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18700..19695
DNA (996bp) protein (332aa)
Fe-S cluster assembly protein SufB n=1 Tax=Marine Group I thaumarchaeote SCGC AB-629-I23 RepID=UPI0003751995
sufB; component of SufBCD complex
FeS assembly protein (SufB) {ECO:0000313|EMBL:AIE95815.1}; TaxID=1455933 species="Archaea; Thaumarchaeota; environmental samples.;" source="uncultured marine thaumarchaeote AD1000_70_C10.;"
Displaying 21 items

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