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13_1_40cm_4_scaffold_3415

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_3415_1
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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comp(1..816)
DNA (816bp) protein (272aa)
Ribonuclease Z (EC:3.1.26.11)
Ribonuclease Z n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46BL2_METBF
ribonuclease Z Tax=RBG_13_Bathyarchaeota_46_16b_curated
13_1_40cm_4_scaffold_3415_2
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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comp(816..1880)
DNA (1065bp) protein (355aa)
methyltransferase-like protein; K07446 tRNA (guanine10-N2)-dimethyltransferase [EC:2.1.1.213] Tax=RBG_13_Bathyarchaeota_46_16b_curated
tRNA (guanine(10)-N2)-dimethyltransferase n=1 Tax=Methanothermobacter thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H) RepID=TMG10_METTH
methyltransferase-like protein
13_1_40cm_4_scaffold_3415_3
RBG_16_Archaea_50_20_curated, Archaea

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2011..2232
DNA (222bp) protein (74aa)
hypothetical protein n=1 Tax=Sulfolobales archaeon Acd1 RepID=UPI00035C5B42
50S ribosomal protein L21; K02889 large subunit ribosomal protein L21e Tax=RBG_16_Archaea_50_20_curated
50S ribosomal protein L21
13_1_40cm_4_scaffold_3415_4
RBG_16_Archaea_50_20_curated, Archaea

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2232..2561
DNA (330bp) protein (110aa)
RNA polymerase Rpb4; K03051 DNA-directed RNA polymerase subunit F [EC:2.7.7.6] Tax=RBG_16_Archaea_50_20_curated
rpoF; DNA-directed RNA polymerase, subunit F (EC:2.7.7.6)
hypothetical protein n=1 Tax=unclassified Crenarchaeota (miscellaneous) RepID=UPI000364BA4E
13_1_40cm_4_scaffold_3415_5
RBG_16_Archaea_50_20_curated, Archaea

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2706..3290
DNA (585bp) protein (195aa)
DNA-binding protein n=2 Tax=Pyrococcus furiosus RepID=I6V3M6_9EURY
DNA-binding protein; K07572 putative nucleotide binding protein Tax=RBG_16_Archaea_50_20_curated
DNA-binding protein
13_1_40cm_4_scaffold_3415_6
RBG_16_Archaea_50_20_curated, Archaea

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3295..4125
DNA (831bp) protein (277aa)
putative ribosomal RNA small subunit methyltransferase A; K02528 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] Tax=RBG_16_Archaea_50_20_curated
Probable ribosomal RNA small subunit methyltransferase A n=1 Tax=Thermococcus kodakaraensis (strain ATCC BAA-918 / JCM 12380 / KOD1) RepID=RSMA_THEKO
ksgA; dimethyladenosine transferase
13_1_40cm_4_scaffold_3415_7
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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comp(4449..5213)
DNA (765bp) protein (255aa)
sucD; succinyl-CoA synthetase subunit alpha (EC:6.2.1.5); K01902 succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] Tax=RBG_13_Bathyarchaeota_46_16b_curated
succinyl-CoA synthetase subunit alpha (EC:6.2.1.5)
Succinyl-CoA ligase [ADP-forming] subunit alpha n=1 Tax=Methanothermobacter thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H) RepID=SUCD_METTH
13_1_40cm_4_scaffold_3415_8
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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comp(5217..6356)
DNA (1140bp) protein (380aa)
succinyl-CoA synthetase subunit beta; K01903 succinyl-CoA synthetase beta subunit [EC:6.2.1.5] Tax=RBG_13_Bathyarchaeota_46_16b_curated
succinyl-CoA synthetase subunit beta (EC:6.2.1.5)
Succinyl-CoA ligase [ADP-forming] subunit beta n=1 Tax=Thermosphaera aggregans (strain DSM 11486 / M11TL) RepID=D5U2D8_THEAM
13_1_40cm_4_scaffold_3415_9
RBG_16_Archaea_50_20_curated, Archaea

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6993..7505
DNA (513bp) protein (171aa)
Transcription elongation factor NusA n=1 Tax=Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938) RepID=Q8TXG0_METKA
nusA; transcription elongation factor NusA-like protein Tax=RBG_16_Archaea_50_20_curated
nusA; transcription elongation factor NusA-like protein
13_1_40cm_4_scaffold_3415_10
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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7513..8712
DNA (1200bp) protein (400aa)
Geranylgeranyl diphosphate reductase (EC:1.3.1.83)
Hypothetical conserved protein n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5SUS4_9BACT
digeranylgeranylglycerophospholipid reductase Tax=RBG_13_Bathyarchaeota_46_16b_curated
13_1_40cm_4_scaffold_3415_11
RIFOXYA2_FULL_Elusimicrobia_53_38_curated, Elusimicrobia, Bacteria

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8789..9925
DNA (1137bp) protein (379aa)
cap:CLDAP_29660 putative L-lysine 6-dehydrogenase id=8266064 bin=CD_OP8_4m species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=CD_OP8_4m organism_group=OP8 (Aminicenantes)
putative L-lysine 6-dehydrogenase Tax=RIFOXYA2_FULL_Elusimicrobia_53_38_curated
Saccharopine dehydrogenase-like protein
13_1_40cm_4_scaffold_3415_12
Thermosediminibacter oceani, Thermosediminibacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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10225..10992
DNA (768bp) protein (256aa)
Chromosome segregation ATPase n=1 Tax=Thermosediminibacter oceani (strain ATCC BAA-1034 / DSM 16646 / JW/IW-1228P) RepID=D9S1A6_THEOJ
chromosome segregation ATPase
Chromosome segregation ATPase {ECO:0000313|EMBL:ADL08985.1}; TaxID=555079 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family III. Incertae Sedis; Thermose
13_1_40cm_4_scaffold_3415_13
Peptococcaceae bacterium BRH_c4b, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11106..11792)
DNA (687bp) protein (229aa)
Chromosome segregation ATPase n=1 Tax=Desulfotomaculum reducens (strain MI-1) RepID=A4J9R8_DESRM
Sporulation initiation inhibitor Soj {ECO:0000313|EMBL:KJS18165.1}; TaxID=1629717 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae.;" source="Peptococcaceae bacterium BRH_c4b.;
cobyrinic acid a,c-diamide synthase
13_1_40cm_4_scaffold_3415_14
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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comp(12198..13862)
DNA (1665bp) protein (555aa)
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
13_1_40cm_4_scaffold_3415_15
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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comp(14336..15124)
DNA (789bp) protein (263aa)
Tax=RBG_13_Bathyarchaeota_38_9_curated
13_1_40cm_4_scaffold_3415_16
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(15134..16384)
DNA (1251bp) protein (417aa)
UPF0272 protein Igag_1707 n=1 Tax=Ignisphaera aggregans (strain DSM 17230 / JCM 13409 / AQ1.S1) RepID=E0SS47_IGNAA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIC15617.1}; TaxID=926571 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera v
13_1_40cm_4_scaffold_3415_17
unknown

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16456..16731
DNA (276bp) protein (92aa)

This feature has no annotations

13_1_40cm_4_scaffold_3415_18
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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17047..17658
DNA (612bp) protein (204aa)
TATA-box-binding protein n=1 Tax=uncultured marine crenarchaeote E48-1C RepID=G9BAV1_9CREN
tbp; TATA-box-binding protein Tax=RBG_13_Bathyarchaeota_38_9_curated
tbp; TATA-box-binding protein
Displaying 18 items

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