ggKbase home page

13_1_40cm_4_scaffold_4290

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_4290_1
unknown

Not on your lists

3..311
DNA (309bp) protein (103aa)

This feature has no annotations

13_1_40cm_4_scaffold_4290_2
Methanosarcina horonobensis, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(419..4072)
DNA (3654bp) protein (1218aa)
PKD domain containing protein n=1 Tax=Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c) RepID=B8GIE2_METPE
Cell surface protein {ECO:0000313|EMBL:AKB80284.1}; TaxID=1434110 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina horo
PKD domain-containing protein
13_1_40cm_4_scaffold_4290_3
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

comp(4399..4878)
DNA (480bp) protein (160aa)
Activator of Hsp90 ATPase 1 family protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TZX4_9CHLR
Activator of Hsp90 ATPase 1 family protein
Activator of Hsp90 ATPase 1 family protein {ECO:0000313|EMBL:AIE87224.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="
13_1_40cm_4_scaffold_4290_4
Dictyoglomus thermophilum, Dictyoglomus, Dictyoglomales, Dictyoglomia, Dictyoglomi, Bacteria

Not on your lists

comp(5354..6469)
DNA (1116bp) protein (372aa)
WD40-like repeat protein n=1 Tax=Fervidobacterium pennivorans (strain DSM 9078 / Ven5) RepID=H9UBE2_FERPD
WD40-like repeat protein
Cell surface protein {ECO:0000313|EMBL:ACI18516.1}; TaxID=309799 species="Bacteria; Dictyoglomi; Dictyoglomales; Dictyoglomaceae; Dictyoglomus.;" source="Dictyoglomus thermophilum (strain ATCC 35947 /
13_1_40cm_4_scaffold_4290_5
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(8648..8893)
DNA (246bp) protein (82aa)
MFS transporter n=1 Tax=Thermoplasmatales archaeon I-plasma RepID=T0MV78_9EURY
major facilitator superfamily protein Tax=RBG_16_Euryarchaeota_68_12_curated
major facilitator superfamily transporter
13_1_40cm_4_scaffold_4290_6
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(8841..9773)
DNA (933bp) protein (311aa)
hypothetical protein n=1 Tax=unclassified Crenarchaeota (miscellaneous) RepID=UPI00035C941A
major facilitator superfamily permease Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
major facilitator superfamily protein
13_1_40cm_4_scaffold_4290_7
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

10120..11037
DNA (918bp) protein (306aa)
Peptidase S53 propeptide n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U0F0_9CHLR
Peptidase S53 propeptide {ECO:0000313|EMBL:EFH82290.1}; Flags: Precursor;; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source=
hypothetical protein
13_1_40cm_4_scaffold_4290_8
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(11253..11519)
DNA (267bp) protein (89aa)
Putative uncharacterized protein n=1 Tax=Candidatus Parvarchaeum acidophilus ARMAN-5 RepID=D6GVL0_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIF83228.1}; TaxID=1459636 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitr
13_1_40cm_4_scaffold_4290_9
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(11834..13669)
DNA (1836bp) protein (612aa)
Fibronectin type III domain protein n=1 Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=D3TD24_ACIB4
parallel beta-helix repeat (two copies) Tax=RBG_16_Euryarchaeota_68_12_curated
Fibronectin type III domain protein
13_1_40cm_4_scaffold_4290_10
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(13689..14822)
DNA (1134bp) protein (378aa)
Fibronectin type III domain protein n=1 Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=B5I9R3_ACIB4
Nitrous oxidase accessory protein Tax=RBG_16_Euryarchaeota_68_12_curated
Fibronectin type III domain protein
13_1_40cm_4_scaffold_4290_11
RBG_13_OP11_40_7b_curated, Microgenomates, Bacteria

Not on your lists

15160..15615
DNA (456bp) protein (152aa)
Putative uncharacterized protein n=1 Tax=Meiothermus silvanus (strain ATCC 700542 / DSM 9946 / VI-R2) RepID=D7BCP6_MEISD
hypothetical protein Tax=RBG_13_OP11_40_7b_curated
hypothetical protein
13_1_40cm_4_scaffold_4290_12
unknown

Not on your lists

comp(15631..16293)
DNA (663bp) protein (221aa)

This feature has no annotations

13_1_40cm_4_scaffold_4290_13
Streptomyces viridochromogenes, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16379..17422)
DNA (1044bp) protein (348aa)
Acetyltransferase n=1 Tax=Streptomyces viridochromogenes DSM 40736 RepID=D9X8Y3_STRVR
Acetyltransferase {ECO:0000313|EMBL:EFL36387.1}; TaxID=591159 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces viridochromogenes DSM 40736.;
acetyltransferase
Displaying 13 items

View Taxonomy