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13_1_40cm_4_scaffold_4718

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_4718_1
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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comp(2..478)
DNA (477bp) protein (159aa)
Tax=RBG_13_Bathyarchaeota_38_9_curated
13_1_40cm_4_scaffold_4718_2
RBG_16_Archaea_50_20_curated, Archaea

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comp(849..1307)
DNA (459bp) protein (153aa)
Deoxyribonuclease/rho motif-related TRAM n=1 Tax=Pyrobaculum calidifontis (strain JCM 11548 / VA1) RepID=A3MX71_PYRCJ
TRAM domain-containing protein Tax=RBG_16_Archaea_50_20_curated
putative RNA-binding protein, contains TRAM domain
13_1_40cm_4_scaffold_4718_3
RBG_16_Archaea_50_20_curated, Archaea

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1310..2074
DNA (765bp) protein (255aa)
F420-0:gamma-glutamyl ligase; K12234 coenzyme F420-0:L-glutamate ligase / coenzyme F420-1:gamma-L-glutamate ligase [EC:6.3.2.31 6.3.2.34] Tax=RBG_16_Archaea_50_20_curated
cofE; F420-0:gamma-glutamyl ligase (EC:6.3.2.-)
hypothetical protein n=1 Tax=candidate division YNPFFA RepID=UPI00036E5F94
13_1_40cm_4_scaffold_4718_4
RBG_16_Archaea_50_20_curated, Archaea

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2148..3341
DNA (1194bp) protein (398aa)
Uncharacterized protein n=1 Tax=Thermococcus barophilus (strain DSM 11836 / MP) RepID=F0LKZ4_THEBM
hypothetical protein Tax=RBG_16_Archaea_50_20_curated
hypothetical protein
13_1_40cm_4_scaffold_4718_5
RBG_16_Archaea_50_20_curated, Archaea

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3488..4297
DNA (810bp) protein (270aa)
Predicted ATPase (PP-loop superfamily) n=1 Tax=Uncultured methanogenic archaeon RC-I RepID=Q0W864_UNCMA
n-type ATP pyrophosphatase superfamily protein Tax=RBG_16_Archaea_50_20_curated
ATPase
13_1_40cm_4_scaffold_4718_6
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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comp(4322..4777)
DNA (456bp) protein (152aa)
pcm; protein-L-isoaspartate O-methyltransferase (EC:2.1.1.77); K00573 protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77] Tax=RBG_13_Bathyarchaeota_46_16b_curated
Protein-L-isoaspartate O-methyltransferase 1 n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=PIMT1_METAC
pcm-1; protein-L-isoaspartate O-methyltransferase
13_1_40cm_4_scaffold_4718_7
unknown

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comp(4777..5112)
DNA (336bp) protein (112aa)

This feature has no annotations

13_1_40cm_4_scaffold_4718_8
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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comp(5492..6538)
DNA (1047bp) protein (349aa)
hypothetical protein; K15429 tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] Tax=RBG_13_Bathyarchaeota_46_16b_curated
Uncharacterized protein n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GWQ0_METFV
hypothetical protein
13_1_40cm_4_scaffold_4718_9
RBG_16_Archaea_50_20_curated, Archaea

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comp(6553..6993)
DNA (441bp) protein (147aa)
Putative HEAT repeat-containing PBS lyase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IKC1_NITGG
HEAT repeat-containing PBS lyase Tax=RBG_16_Archaea_50_20_curated
HEAT repeat-containing PBS lyase
13_1_40cm_4_scaffold_4718_10
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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comp(6941..7606)
DNA (666bp) protein (222aa)
Protein of unknown function (DUF1684) id=14627918 bin=bin7_NC10_sister species=Halobiforma lacisalsi genus=Halobiforma taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=bin7_NC10_sister organism_group=NC10
hypothetical protein; K09164 hypothetical protein Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
Protein of unknown function (DUF1684)
13_1_40cm_4_scaffold_4718_11
RBG_16_Archaea_50_20_curated, Archaea

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8210..10198
DNA (1989bp) protein (663aa)
Putative circadian clock protein, KaiC n=1 Tax=Thermofilum pendens (strain Hrk 5) RepID=A1S0H8_THEPD
hypothetical protein containing KaiC-domain
Tax=RBG_16_Archaea_50_20_curated
13_1_40cm_4_scaffold_4718_12
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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10249..11028
DNA (780bp) protein (260aa)
diphthine synthase (EC:2.1.1.98); K00586 diphthine synthase [EC:2.1.1.98] Tax=RBG_13_Bathyarchaeota_38_9_curated
diphthine synthase (EC:2.1.1.98)
Diphthine synthase n=1 Tax=Thermococcus kodakaraensis (strain ATCC BAA-918 / JCM 12380 / KOD1) RepID=DPHB_THEKO
13_1_40cm_4_scaffold_4718_13
unknown

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11373..11909
DNA (537bp) protein (179aa)

This feature has no annotations

13_1_40cm_4_scaffold_4718_14
unknown

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12161..12406
DNA (246bp) protein (82aa)

This feature has no annotations

13_1_40cm_4_scaffold_4718_15
unknown

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12351..12674
DNA (324bp) protein (108aa)

This feature has no annotations

13_1_40cm_4_scaffold_4718_16

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12770..13351
DNA (582bp) protein (194aa)
NUDIX hydrolase n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LKE9_HALO1
Uncharacterized protein {ECO:0000313|EMBL:KKK53640.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
NUDIX hydrolase, coenzyme A pyrophosphatase family
13_1_40cm_4_scaffold_4718_17
Rivularia sp. PCC 7116, Rivularia, Nostocales, Cyanobacteria, Bacteria

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comp(13355..14212)
DNA (858bp) protein (286aa)
hypothetical protein n=1 Tax=Fischerella muscicola RepID=UPI0002F70D89
hypothetical protein
TIGR00268 family protein {ECO:0000313|EMBL:AFY58767.1}; TaxID=373994 species="Bacteria; Cyanobacteria; Nostocales; Rivulariaceae; Rivularia.;" source="Rivularia sp. PCC 7116.;"
13_1_40cm_4_scaffold_4718_18
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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14224..14862
DNA (639bp) protein (213aa)
1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase n=1 Tax=Korarchaeum cryptofilum (strain OPF8) RepID=B1L453_KORCO
1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase; K06898 Tax=RBG_13_Bathyarchaeota_38_9_curated
1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase
Displaying 18 items

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