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13_1_40cm_4_scaffold_1002

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_1002_1
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

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comp(2..208)
-----------------
DNA (207bp)
protein (69aa)
putative 3-hydroxyacyl-CoA dehydrogenase (EC:1.1.1.35)
Putative 3-hydroxyacyl-CoA dehydrogenase {ECO:0000313|EMBL:CBK42799.1}; EC=1.1.1.35 {ECO:0000313|EMBL:CBK42799.1};; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospi
Putative 3-hydroxyacyl-CoA dehydrogenase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PHR2_9BACT
13_1_40cm_4_scaffold_1002_2
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

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comp(307..1449)
-----------------
DNA (1143bp)
protein (381aa)
fadA; 3-ketoacyl-CoA thiolase (EC:2.3.1.16)
3-ketoacyl-CoA thiolase {ECO:0000313|EMBL:CBK42800.1}; EC=2.3.1.16 {ECO:0000313|EMBL:CBK42800.1};; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Can
3-ketoacyl-CoA thiolase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PHR3_9BACT
13_1_40cm_4_scaffold_1002_3
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

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comp(1484..3166)
-----------------
DNA (1683bp)
protein (561aa)
fadD; long-chain-fatty-acid--CoA ligase (EC:6.2.1.3)
Long-chain-fatty-acid--CoA ligase {ECO:0000313|EMBL:CBK42801.1}; EC=6.2.1.3 {ECO:0000313|EMBL:CBK42801.1};; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" so
Long-chain-fatty-acid--CoA ligase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PHR4_9BACT
13_1_40cm_4_scaffold_1002_4
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

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comp(3183..3935)
-----------------
DNA (753bp)
protein (251aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PHR5_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK42802.1}; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
13_1_40cm_4_scaffold_1002_5
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

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4256..4837
-----------------
DNA (582bp)
protein (194aa)
putative 4-hydroxyphenylpyruvate dioxygenase (fragment) (EC:1.13.11.27)
Putative 4-hydroxyphenylpyruvate dioxygenase {ECO:0000313|EMBL:CBK42803.1}; EC=1.13.11.27 {ECO:0000313|EMBL:CBK42803.1};; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Ni
Putative 4-hydroxyphenylpyruvate dioxygenase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PHR6_9BACT
13_1_40cm_4_scaffold_1002_6
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

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4987..6096
-----------------
DNA (1110bp)
protein (370aa)
putative homogentisate 1,2-dioxygenase (EC:1.13.11.5)
Putative Homogentisate 1,2-dioxygenase {ECO:0000313|EMBL:CBK42804.1}; EC=1.13.11.5 {ECO:0000313|EMBL:CBK42804.1};; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospir
Putative Homogentisate 1,2-dioxygenase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PHR7_9BACT
13_1_40cm_4_scaffold_1002_7
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

6093..7103
-----------------
DNA (1011bp)
protein (337aa)
putative fumarylacetoacetase (EC:3.7.1.2)
Putative Fumarylacetoacetase {ECO:0000313|EMBL:CBK42805.1}; EC=3.7.1.2 {ECO:0000313|EMBL:CBK42805.1};; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source=
Putative Fumarylacetoacetase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PHR8_9BACT
13_1_40cm_4_scaffold_1002_8
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

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7100..7864
-----------------
DNA (765bp)
protein (255aa)
putative orotate phosphoribosyltransferase (EC:2.4.2.10)
Putative Orotate phosphoribosyltransferase (Modular protein) {ECO:0000313|EMBL:CBK42806.1}; EC=2.4.2.10 {ECO:0000313|EMBL:CBK42806.1};; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitr
Putative Orotate phosphoribosyltransferase (Modular protein) n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PHR9_9BACT
13_1_40cm_4_scaffold_1002_9
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

7959..8960
-----------------
DNA (1002bp)
protein (334aa)
putative 2-oxoisovalerate dehydrogenase subunit alpha (EC:1.2.4.4)
Putative 2-oxoisovalerate dehydrogenase, alpha subunit (TPP-binding module) {ECO:0000313|EMBL:CBK42807.1}; EC=1.2.4.4 {ECO:0000313|EMBL:CBK42807.1};; TaxID=330214 species="Bacteria; Nitrospirae; Nitro
Putative 2-oxoisovalerate dehydrogenase, alpha subunit (TPP-binding module) n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PHS0_9BACT
13_1_40cm_4_scaffold_1002_10
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

8957..9949
-----------------
DNA (993bp)
protein (331aa)
putative 2-oxoisovalerate dehydrogenase subunit beta (EC:1.2.4.4)
Putative 2-oxoisovalerate dehydrogenase, beta subunit (Transketolase) {ECO:0000313|EMBL:CBK42808.1}; EC=1.2.4.4 {ECO:0000313|EMBL:CBK42808.1};; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospiral
Putative 2-oxoisovalerate dehydrogenase, beta subunit (Transketolase) n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PHS1_9BACT
13_1_40cm_4_scaffold_1002_11
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

10008..11168
-----------------
DNA (1161bp)
protein (387aa)
putative branched-chain alpha-keto acid dehydrogenase, dihydrolipoamide acyltransferase (E2) component (EC:2.3.1.168)
Putative branched-chain alpha-keto acid dehydrogenase, dihydrolipoamide acyltransferase (E2) component {ECO:0000313|EMBL:CBK42809.1}; EC=2.3.1.168 {ECO:0000313|EMBL:CBK42809.1};; TaxID=330214 species=
Putative branched-chain alpha-keto acid dehydrogenase, dihydrolipoamide acyltransferase (E2) component n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PHS2_9BACT
13_1_40cm_4_scaffold_1002_12
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

11193..12077
-----------------
DNA (885bp)
protein (295aa)
paaH; 3-hydroxybutyryl-CoA dehydrogenase (EC:1.1.1.157)
3-hydroxybutyryl-CoA dehydrogenase {ECO:0000313|EMBL:CBK42811.1}; EC=1.1.1.157 {ECO:0000313|EMBL:CBK42811.1};; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;"
3-hydroxybutyryl-CoA dehydrogenase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PHS4_9BACT
13_1_40cm_4_scaffold_1002_13
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

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12150..13745
-----------------
DNA (1596bp)
protein (532aa)
scpAa; methylmalonyl-CoA mutase (N-terminal fragment) (EC:5.4.99.2)
Methylmalonyl-CoA mutase (N-terminal) {ECO:0000313|EMBL:CBK42812.1}; EC=5.4.99.2 {ECO:0000313|EMBL:CBK42812.1};; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.
Methylmalonyl-CoA mutase (N-terminal) n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PHS5_9BACT
13_1_40cm_4_scaffold_1002_14
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

14008..14853
-----------------
DNA (846bp)
protein (282aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PHS6_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK42813.1}; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
13_1_40cm_4_scaffold_1002_15
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

14850..15260
-----------------
DNA (411bp)
protein (137aa)
scpAb; methylmalonyl-CoA mutase (C-terminal fragment) (EC:5.4.99.2)
Methylmalonyl-CoA mutase (C-terminal) {ECO:0000313|EMBL:CBK42814.1}; EC=5.4.99.2 {ECO:0000313|EMBL:CBK42814.1};; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.
Methylmalonyl-CoA mutase (C-terminal) n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PHS7_9BACT
13_1_40cm_4_scaffold_1002_16
RLO_Nitrospinae_39_16, Nitrospinae, Bacteria

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15818..16507
-----------------
DNA (690bp)
protein (230aa)
propanoyl-CoA C-acyltransferase (EC:2.3.1.176); K00626 acetyl-CoA C-acetyltransferase [EC:2.3.1.9] Tax=RifCSPlowO2_12_Nitrospinae_39_16_curated
propanoyl-CoA C-acyltransferase (EC:2.3.1.176)
Propanoyl-CoA C-acyltransferase id=2762591 bin=GWF2_Geobacter_54_21 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Geobacter_54_21 organism_group=Deltaproteobacteria organism_desc=Good
13_1_40cm_4_scaffold_1002_17
GWC2_Geobacteraceae_53_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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16622..17110
-----------------
DNA (489bp)
protein (163aa)
hypothetical protein Tax=GWC2_Geobacteraceae_53_11_curated
Putative uncharacterized protein id=2762587 bin=GWF2_Geobacter_54_21 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Geobacter_54_21 organism_group=Deltaproteobacteria organism_desc=Good
hypothetical protein
13_1_40cm_4_scaffold_1002_18
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

17107..17331
-----------------
DNA (225bp)
protein (75aa)
argK; lAO/AO transport system ATPase (fragment) (EC:2.7.-.-)
LAO/AO transport system ATPase {ECO:0000313|EMBL:CBK42818.1}; EC=2.7.-.- {ECO:0000313|EMBL:CBK42818.1};; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" sourc
LAO/AO transport system ATPase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PHT1_9BACT
Displaying 18 items

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