ggKbase home page

13_1_40cm_4_scaffold_1854

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_1854_1
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(1..588)
DNA (588bp) protein (196aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PBQ2_9BACT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
hypothetical protein
13_1_40cm_4_scaffold_1854_2
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(620..1045)
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PBQ2_9BACT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
hypothetical protein
13_1_40cm_4_scaffold_1854_3
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(1111..1944)
DNA (834bp) protein (278aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PB58_9BACT
hypothetical protein; K08977 putative membrane protein Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
hypothetical protein
13_1_40cm_4_scaffold_1854_4
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(1973..2395)
DNA (423bp) protein (141aa)
putative dihydroflavanol 4-reductase (EC:1.1.1.219); K00091 dihydroflavonol-4-reductase [EC:1.1.1.219] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
putative dihydroflavanol 4-reductase (EC:1.1.1.219)
Putative Dihydroflavanol 4-reductase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PB59_9BACT
13_1_40cm_4_scaffold_1854_5
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(2346..2942)
DNA (597bp) protein (199aa)
putative dihydroflavanol 4-reductase (EC:1.1.1.219); K00091 dihydroflavonol-4-reductase [EC:1.1.1.219] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
putative dihydroflavanol 4-reductase (EC:1.1.1.219)
Putative Dihydroflavanol 4-reductase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PB59_9BACT
13_1_40cm_4_scaffold_1854_6
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(3051..3941)
DNA (891bp) protein (297aa)
ispA; geranyltranstransferase (EC:2.5.1.10 2.5.1.1); K13789 geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
ispA; geranyltranstransferase (EC:2.5.1.10 2.5.1.1)
Geranyltranstransferase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PB60_9BACT
13_1_40cm_4_scaffold_1854_7
RBG_19FT_COMBO_Nitrospirae_58_9_curated, Nitrospirae, Bacteria

Not on your lists

4056..4370
DNA (315bp) protein (105aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PB71_9BACT
hypothetical protein Tax=RBG_19FT_COMBO_Nitrospirae_58_9_curated
hypothetical protein
13_1_40cm_4_scaffold_1854_8
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

4370..4714
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PB72_9BACT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
hypothetical protein
13_1_40cm_4_scaffold_1854_9
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

4727..5347
DNA (621bp) protein (207aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PB74_9BACT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
hypothetical protein
13_1_40cm_4_scaffold_1854_10
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

5396..6457
DNA (1062bp) protein (354aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PB76_9BACT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
hypothetical protein
13_1_40cm_4_scaffold_1854_11
RBG_19FT_COMBO_Nitrospirae_58_9_curated, Nitrospirae, Bacteria

Not on your lists

6479..7597
DNA (1119bp) protein (373aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PB78_9BACT
hypothetical protein Tax=RBG_19FT_COMBO_Nitrospirae_58_9_curated
hypothetical protein
13_1_40cm_4_scaffold_1854_12

Not on your lists

7717..8604
DNA (888bp) protein (296aa)
TPR repeat-containing protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D7S1_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KKL27766.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
13_1_40cm_4_scaffold_1854_13
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(8688..8870)
DNA (183bp) protein (61aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PB82_9BACT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
hypothetical protein
13_1_40cm_4_scaffold_1854_14
unknown

Not on your lists

comp(8951..9340)
DNA (390bp) protein (130aa)

This feature has no annotations

13_1_40cm_4_scaffold_1854_15
unknown

Not on your lists

comp(9484..9870)
DNA (387bp) protein (129aa)

This feature has no annotations

13_1_40cm_4_scaffold_1854_16
RLO_PLX_64_10, Bacteria

Not on your lists

10126..10965
DNA (840bp) protein (280aa)
AAA ATPase Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
ATPase id=14627844 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Marinimicrobia tax=bin7_NC10_sister organism_group=NC10
AAA ATPase
13_1_40cm_4_scaffold_1854_17
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(10972..14175)
DNA (3204bp) protein (1068aa)
Acriflavin resistance protein acrB n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PB85_9BACT
acrB; acriflavin resistance protein acrB Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
acrB; acriflavin resistance protein acrB
13_1_40cm_4_scaffold_1854_18
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(14258..15436)
DNA (1179bp) protein (393aa)
Putative Acriflavine resistance protein acrA n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PB86_9BACT
putative acriflavine resistance protein AcrA Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
putative acriflavine resistance protein AcrA
13_1_40cm_4_scaffold_1854_19
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(15433..16086)
DNA (654bp) protein (218aa)
Putative Transcriptional regulator acrR n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PB87_9BACT
putative transcriptional regulator AcrR Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
putative transcriptional regulator AcrR rbh
13_1_40cm_4_scaffold_1854_20
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(16210..17889)
DNA (1680bp) protein (560aa)
pepM; phosphoenolpyruvate mutase (EC:5.4.2.9); K01841 phosphoenolpyruvate phosphomutase [EC:5.4.2.9] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
Phosphoenolpyruvate phosphomutase n=1 Tax=uncultured Acidobacteria bacterium RepID=H5SG51_9BACT
hypothetical protein
13_1_40cm_4_scaffold_1854_21
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(17963..18487)
DNA (525bp) protein (175aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PB90_9BACT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
hypothetical protein
13_1_40cm_4_scaffold_1854_22
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

18652..19149
DNA (498bp) protein (166aa)
comD; sulfopyruvate decarboxylase subunit alpha (EC:4.1.1.79) Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
comD; sulfopyruvate decarboxylase subunit alpha (EC:4.1.1.79)
Sulfopyruvate decarboxylase, alpha subunit n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PB91_9BACT
13_1_40cm_4_scaffold_1854_23
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

19146..19724
DNA (579bp) protein (193aa)
comE; sulfopyruvate decarboxylase subunit beta (EC:4.1.1.79)
Sulfopyruvate decarboxylase, beta subunit {ECO:0000313|EMBL:CBK40501.1}; EC=4.1.1.79 {ECO:0000313|EMBL:CBK40501.1};; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrosp
Sulfopyruvate decarboxylase, beta subunit n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PB92_9BACT
Displaying 23 items

View Taxonomy