ggKbase home page

13_1_40cm_4_scaffold_368

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_368_1
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(3..323)
DNA (321bp) protein (107aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PI72_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK42959.1}; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
13_1_40cm_4_scaffold_368_2
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(358..771)
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PI73_9BACT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
hypothetical protein
13_1_40cm_4_scaffold_368_3
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(906..1745)
DNA (840bp) protein (280aa)
putative nitrate oxidoreductase subunit gamma (EC:1.7.99.4) Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
putative nitrate oxidoreductase subunit gamma (EC:1.7.99.4)
Putative Nitrate oxidoreductase, gamma subunit n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PI74_9BACT
13_1_40cm_4_scaffold_368_4
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(1840..3093)
DNA (1254bp) protein (418aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PI75_9BACT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
hypothetical protein
13_1_40cm_4_scaffold_368_5
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(3160..3468)
DNA (309bp) protein (103aa)
Sec-independent protein translocase protein TatA n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PI76_9BACT
tatA; twin-arginine translocation protein tatA/E
tatA; twin-arginine translocation protein tatA/E; K03116 sec-independent protein translocase protein TatA Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
13_1_40cm_4_scaffold_368_6
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(3487..4299)
DNA (813bp) protein (271aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PI77_9BACT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
hypothetical protein
13_1_40cm_4_scaffold_368_7
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(4323..5438)
DNA (1116bp) protein (372aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PI78_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK42965.1}; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
13_1_40cm_4_scaffold_368_8
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(5579..7360)
DNA (1782bp) protein (594aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PI79_9BACT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
hypothetical protein
13_1_40cm_4_scaffold_368_9
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(7668..8621)
DNA (954bp) protein (318aa)
putative nitrate reductase subunit gamma (EC:1.7.99.4) Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
putative nitrate reductase subunit gamma (EC:1.7.99.4)
Putative Nitrate reductase, gamma subunit n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PI81_9BACT
13_1_40cm_4_scaffold_368_10
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(8678..9511)
DNA (834bp) protein (278aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PI82_9BACT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
hypothetical protein
13_1_40cm_4_scaffold_368_11
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(9869..10480)
DNA (612bp) protein (204aa)
napG; ferredoxin-type protein NapG (EC:1.7.99.4); K02573 ferredoxin-type protein NapG Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
napG; ferredoxin-type protein NapG (EC:1.7.99.4)
Ferredoxin-type protein NapG n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PI83_9BACT
13_1_40cm_4_scaffold_368_12
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(10493..11488)
DNA (996bp) protein (332aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PI84_9BACT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
hypothetical protein
13_1_40cm_4_scaffold_368_13
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

11627..12733
DNA (1107bp) protein (369aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PI85_9BACT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
hypothetical protein
13_1_40cm_4_scaffold_368_14
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(12736..14175)
DNA (1440bp) protein (480aa)
Fis family transcriptional regulator n=1 Tax=Candidatus Poribacteria sp. WGA-A3 RepID=UPI0001C2B054
sigma-54 dependent transcriptional regulator Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
sigma-54 dependent transcriptional regulator
13_1_40cm_4_scaffold_368_15
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(14172..16784)
DNA (2613bp) protein (871aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121, ECO:0000313|EMBL:CBK42974.1};; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae;
putative histidine kinase (EC:2.7.13.3)
Putative Histidine kinase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PI87_9BACT
13_1_40cm_4_scaffold_368_16
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(16729..17334)
DNA (606bp) protein (202aa)
putative histidine kinase (EC:2.7.13.3)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121, ECO:0000313|EMBL:CBK42974.1};; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae;
Putative Histidine kinase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PI87_9BACT
13_1_40cm_4_scaffold_368_17
RBG_19FT_COMBO_Nitrospirae_58_9_curated, Nitrospirae, Bacteria

Not on your lists

comp(17429..18346)
DNA (918bp) protein (306aa)
Protein-export membrane protein SecF n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PI88_9BACT
secF; protein-export membrane protein SecF; K03074 preprotein translocase subunit SecF Tax=RBG_19FT_COMBO_Nitrospirae_58_9_curated
secF; protein-export membrane protein SecF
13_1_40cm_4_scaffold_368_18
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(18456..18623)
DNA (168bp) protein (56aa)
Protein translocase subunit SecD n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PI89_9BACT
secD; protein-export membrane protein SecD
Protein translocase subunit SecD {ECO:0000256|HAMAP-Rule:MF_01463}; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
13_1_40cm_4_scaffold_368_19
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(18620..19096)
DNA (477bp) protein (159aa)
Protein translocase subunit SecD n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PI89_9BACT
secD; protein-export membrane protein SecD; K03072 preprotein translocase subunit SecD Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
secD; protein-export membrane protein SecD
Displaying 19 items

View Taxonomy