ggKbase home page

13_1_40cm_4_scaffold_481

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_481_1
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(3..176)
DNA (174bp) protein (58aa)
putative lactoylglutathione lyase (EC:4.4.1.5); K01759 lactoylglutathione lyase [EC:4.4.1.5] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
putative lactoylglutathione lyase (EC:4.4.1.5)
Putative Lactoylglutathione lyase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PAW1_9BACT
13_1_40cm_4_scaffold_481_2
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(195..701)
DNA (507bp) protein (169aa)
Putative N-acetyltransferase n=1 Tax=uncultured bacterium RepID=K0J3Q4_9BACT
putative n-acetyltransferase Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
putative n-acetyltransferase
13_1_40cm_4_scaffold_481_3
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(679..1386)
DNA (708bp) protein (236aa)
putative polysaccharide deacetylase (EC:3.5.1.-) Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
putative polysaccharide deacetylase (EC:3.5.1.-)
Putative polysaccharide deacetylase n=1 Tax=uncultured bacterium RepID=K0IWB3_9BACT
13_1_40cm_4_scaffold_481_4
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

1621..2787
DNA (1167bp) protein (389aa)
putative membrane-associated zinc metallopeptidase (EC:3.4.24.-)
Putative Membrane-associated zinc metallopeptidase containing CBS domain pair {ECO:0000313|EMBL:CBK40373.1}; EC=3.4.24.- {ECO:0000313|EMBL:CBK40373.1};; TaxID=330214 species="Bacteria; Nitrospirae; Ni
Putative Membrane-associated zinc metallopeptidase containing CBS domain pair n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PAW4_9BACT
13_1_40cm_4_scaffold_481_5

Not on your lists

comp(2817..4178)
DNA (1362bp) protein (454aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K0ISW4_9BACT
Uncharacterized protein {ECO:0000313|EMBL:BAM45359.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
13_1_40cm_4_scaffold_481_6
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(4280..5116)
DNA (837bp) protein (279aa)
putative tRNA-processing ribonuclease BN (EC:3.1.-.-); K07058 membrane protein Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
putative tRNA-processing ribonuclease BN (EC:3.1.-.-)
Putative tRNA-processing ribonuclease BN n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PAW5_9BACT
13_1_40cm_4_scaffold_481_7

Not on your lists

comp(5221..6702)
DNA (1482bp) protein (494aa)
NADH-quinone oxidoreductase subunit N {ECO:0000256|HAMAP-Rule:MF_00445}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_00445};; NADH dehydrogenase I subunit N {ECO:0000256|HAMAP-Rule:MF_00445}; NDH-1 subunit
nuoN; NADH-quinone oxidoreductase membrane subunit N (EC:1.6.99.5)
NADH-quinone oxidoreductase subunit N n=1 Tax=uncultured bacterium RepID=K0J3Q0_9BACT
13_1_40cm_4_scaffold_481_8

Not on your lists

comp(6699..8210)
DNA (1512bp) protein (504aa)
nuoM; NADH-quinone oxidoreductase membrane subunit M (EC:1.6.99.5)
NADH-quinone oxidoreductase subunit M n=1 Tax=uncultured bacterium RepID=K0IWA7_9BACT
NADH-quinone oxidoreductase subunit M {ECO:0000313|EMBL:BAM45356.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
13_1_40cm_4_scaffold_481_9
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(8285..10195)
DNA (1911bp) protein (637aa)
nuoL; NADH-quinone oxidoreductase membrane subunit L (EC:1.6.99.5)
NADH-quinone oxidoreductase, membrane subunit L {ECO:0000313|EMBL:CBK40377.1}; EC=1.6.99.5 {ECO:0000313|EMBL:CBK40377.1};; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; N
NADH-quinone oxidoreductase, membrane subunit L n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PAW8_9BACT
13_1_40cm_4_scaffold_481_10
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(10242..10544)
DNA (303bp) protein (101aa)
nuoK; NADH-quinone oxidoreductase membrane subunit K (EC:1.6.99.5); K00340 NADH-quinone oxidoreductase subunit K [EC:1.6.5.3] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
nuoK; NADH-quinone oxidoreductase membrane subunit K (EC:1.6.99.5)
NADH-quinone oxidoreductase subunit K n=1 Tax=uncultured bacterium RepID=K0ISW0_9BACT
13_1_40cm_4_scaffold_481_11
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(10639..11154)
DNA (516bp) protein (172aa)
nuoJ; NADH-quinone oxidoreductase membrane subunit J (EC:1.6.99.5); K00339 NADH-quinone oxidoreductase subunit J [EC:1.6.5.3] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
nuoJ; NADH-quinone oxidoreductase membrane subunit J (EC:1.6.99.5)
NADH-ubiquinone oxidoreductase n=1 Tax=Candidatus Poribacteria sp. WGA-A3 RepID=UPI0001C2AC2F
13_1_40cm_4_scaffold_481_12
RBG_19FT_COMBO_Nitrospirae_58_9_curated, Nitrospirae, Bacteria

Not on your lists

comp(11162..11329)
DNA (168bp) protein (56aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8P7K4_9BACT
hypothetical protein Tax=RBG_19FT_COMBO_Nitrospirae_58_9_curated
hypothetical protein
13_1_40cm_4_scaffold_481_13
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(11343..11888)
DNA (546bp) protein (182aa)
nuoI; NADH-quinone oxidoreductase subunit I (EC:1.6.99.5); K00338 NADH-quinone oxidoreductase subunit I [EC:1.6.5.3] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
nuoI; NADH-quinone oxidoreductase subunit I (EC:1.6.99.5)
NADH-quinone oxidoreductase subunit I n=1 Tax=uncultured bacterium RepID=K0J3P1_9BACT
13_1_40cm_4_scaffold_481_14
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(11981..13048)
DNA (1068bp) protein (356aa)
nuoH; NADH-quinone oxidoreductase membrane subunit H (EC:1.6.99.5); K00337 NADH-quinone oxidoreductase subunit H [EC:1.6.5.3] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
nuoH; NADH-quinone oxidoreductase membrane subunit H (EC:1.6.99.5)
NADH-quinone oxidoreductase subunit H n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PAX2_9BACT
13_1_40cm_4_scaffold_481_15
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(13178..15949)
DNA (2772bp) protein (924aa)
nuoG; NADH-quinone oxidoreductase subunit G (EC:1.6.99.5) Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
nuoG; NADH-quinone oxidoreductase subunit G (EC:1.6.99.5)
NADH-quinone oxidoreductase subunit G n=1 Tax=uncultured bacterium RepID=K0IYC1_9BACT
13_1_40cm_4_scaffold_481_16
RBG_19FT_COMBO_Nitrospirae_58_9_curated, Nitrospirae, Bacteria

Not on your lists

comp(15958..17139)
DNA (1182bp) protein (394aa)
nuoF; NADH-quinone oxidoreductase subunit F (EC:1.6.99.5); K00335 NADH-quinone oxidoreductase subunit F [EC:1.6.5.3] Tax=RBG_19FT_COMBO_Nitrospirae_58_9_curated
nuoF; NADH-quinone oxidoreductase subunit F (EC:1.6.99.5)
NADH-quinone oxidoreductase, subunit F n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PAX4_9BACT
Displaying 16 items

View Taxonomy