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13_1_40cm_4_scaffold_10555

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_10555_1
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(2..343)
DNA (342bp) protein (114aa)
thiol--disulfide interchange protein; K04084 thiol:disulfide interchange protein DsbD [EC:1.8.1.8] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Thiol--disulfide interchange protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ADP4_GEMAT
cytochrome c biogenesis protein transmembrane region
13_1_40cm_4_scaffold_10555_2
Pontibacter sp. BAB1700, Pontibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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373..1023
DNA (651bp) protein (217aa)
oxidoreductase n=1 Tax=Pontibacter roseus RepID=UPI00035F9D87
Uncharacterized protein {ECO:0000313|EMBL:EJF09989.1}; TaxID=1144253 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Pontibacter.;" source="Pontibacter sp. BAB1700.;"
oxidoreductase
13_1_40cm_4_scaffold_10555_3
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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1023..1463
DNA (441bp) protein (147aa)
cytidine deaminase n=1 Tax=Pseudomonas thermotolerans RepID=UPI000360E7E6
zinc-binding CMP/dCMP deaminase
CMP/dCMP deaminase, zinc-binding protein {ECO:0000313|EMBL:ABQ28301.1}; TaxID=351605 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Ge
13_1_40cm_4_scaffold_10555_4
Tolypothrix campylonemoides, Tolypothrix, Nostocales, Cyanobacteria, Bacteria

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comp(1534..2106)
DNA (573bp) protein (191aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KIJ70809.1}; TaxID=1245935 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Tolypothrix.;" source="Tolypothrix campylonemoides VB511288.;"
13_1_40cm_4_scaffold_10555_5
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2354..2746
DNA (393bp) protein (131aa)
Amidohydrolase family protein 19 n=1 Tax=Achromobacter xylosoxidans (strain A8) RepID=E3HX81_ACHXA
amidohydrolase
Amidohydrolase family protein 19 {ECO:0000313|EMBL:ADP17603.1}; TaxID=762376 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobac
13_1_40cm_4_scaffold_10555_6
R_Elusimicrobia_64_13, Elusimicrobia, Bacteria

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3093..3476
DNA (384bp) protein (128aa)
membrane protein n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI0002E7838A
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_64_13_curated
hypothetical protein
13_1_40cm_4_scaffold_10555_7
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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3602..3856
DNA (255bp) protein (85aa)
S4 domain n=1 Tax=Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298) RepID=Q82S00_NITEU
RNA-binding S4 domain-containing protein
RNA-binding S4 domain protein {ECO:0000313|EMBL:ADB48766.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibact
13_1_40cm_4_scaffold_10555_8
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(3853..4941)
DNA (1089bp) protein (363aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAU0_GEMAT
protein of unknown function DUF4098
Uncharacterized protein {ECO:0000313|EMBL:AHG92024.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_4_scaffold_10555_9
Prevotella sp. CAG:279, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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5011..5451
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Prevotella sp. CAG:279 RepID=R7HN50_9BACT
membrane protein
Uncharacterized protein {ECO:0000313|EMBL:CDE41114.1}; TaxID=1262924 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotel
13_1_40cm_4_scaffold_10555_10
Porphyromonas sp. COT-290 OH860, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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5455..6456
DNA (1002bp) protein (334aa)
Band 7 protein n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XTR7_9BACT
SPFH/Band 7/PHB domain protein {ECO:0000313|EMBL:KGN83610.1}; TaxID=1515615 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp.
hypothetical protein
13_1_40cm_4_scaffold_10555_11
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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6453..7595
DNA (1143bp) protein (381aa)
acyl-CoA dehydrogenase (EC:1.3.99.-)
Acyl-CoA dehydrogenase domain-containing protein n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XXQ0_9BACT
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:ETX05175.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
13_1_40cm_4_scaffold_10555_12
unknown

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7616..7909
DNA (294bp) protein (98aa)

This feature has no annotations

13_1_40cm_4_scaffold_10555_13
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

7970..9121
DNA (1152bp) protein (384aa)
kynurenine--oxoglutarate transaminase (EC:2.6.1.7); K10907 aminotransferase [EC:2.6.1.-] Tax=RBG_16_Gemmatimonadetes_66_8_curated
aminotransferase (EC:2.6.1.-) id=24561144 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
aminotransferase class I and II
13_1_40cm_4_scaffold_10555_14
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(9118..11007)
DNA (1890bp) protein (630aa)
putative serine/threonine protein kinase (EC:2.7.11.1) Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
putative serine/threonine protein kinase (EC:2.7.11.1)
Putative serine/threonine protein kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AD13_GEMAT
13_1_40cm_4_scaffold_10555_15
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(11032..12552)
DNA (1521bp) protein (507aa)
putative serine/threonine protein kinase (EC:2.7.11.1) Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Putative serine/threonine protein kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AD13_GEMAT
protein kinase
13_1_40cm_4_scaffold_10555_16
Chloracidobacterium thermophilum, Chloracidobacterium, Acidobacteria, Bacteria

Not on your lists

12652..13581
DNA (930bp) protein (310aa)
Putative oligopeptide transporter, OPT family n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LI45_CHLTF
putative oligopeptide transporter, OPT family
Putative oligopeptide transporter, OPT family {ECO:0000313|EMBL:AEP11261.1}; TaxID=981222 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Chloracidobacterium.;" source="Chloracidobacter
Displaying 16 items

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