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13_1_40cm_4_scaffold_1142

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_1142_1
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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1..174
DNA (174bp) protein (58aa)
30S ribosomal protein S15 n=1 Tax=Sutterella parvirubra YIT 11816 RepID=H3KFK0_9BURK
rpsO; 30S ribosomal protein S15; K02956 small subunit ribosomal protein S15 Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
ribosomal protein S15
13_1_40cm_4_scaffold_1142_2
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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260..2335
DNA (2076bp) protein (692aa)
pnp; polyribonucleotide nucleotidyltransferase (EC:2.7.7.8); K00962 polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Polyribonucleotide nucleotidyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=PNP_GEMAT
Polyribonucleotide nucleotidyltransferase
13_1_40cm_4_scaffold_1142_3
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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2479..3633
DNA (1155bp) protein (385aa)
Putative S16B family peptidase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3Y0_GEMAT
putative S16B family peptidase Tax=RBG_16_Gemmatimonadetes_66_8_curated
peptidase M16 domain protein
13_1_40cm_4_scaffold_1142_4
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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3630..4742
DNA (1113bp) protein (371aa)
alanine dehydrogenase; K00259 alanine dehydrogenase [EC:1.4.1.1] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Alanine dehydrogenase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3X9_GEMAT
alanine dehydrogenase
13_1_40cm_4_scaffold_1142_5
unknown

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4808..5008
DNA (201bp) protein (67aa)

This feature has no annotations

13_1_40cm_4_scaffold_1142_6
unknown

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5196..5750
DNA (555bp) protein (185aa)

This feature has no annotations

13_1_40cm_4_scaffold_1142_7
unknown

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5760..6362
DNA (603bp) protein (201aa)

This feature has no annotations

13_1_40cm_4_scaffold_1142_8
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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6986..8611
DNA (1626bp) protein (542aa)
Regulator of chromosome condensation RCC1 n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NG10_ROSCS
regulator of chromosome condensation, RCC1 Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
regulator of chromosome condensation RCC1
13_1_40cm_4_scaffold_1142_9

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comp(8678..9943)
DNA (1266bp) protein (422aa)
hypothetical protein n=1 Tax=Salinimonas chungwhensis RepID=UPI00036DE653
Uncharacterized protein {ECO:0000313|EMBL:KKM84707.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
group 1 glycosyl transferase
13_1_40cm_4_scaffold_1142_10
RLO_RIF05_58_11, RIF5, Bacteria

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comp(9940..10809)
DNA (870bp) protein (290aa)
2-heptaprenyl-1,4-naphthoquinone methyltransferase n=1 Tax=Streptomyces sp. C RepID=D9VQD3_9ACTO
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_RIF05_58_11_curated
ubiquinone biosynthesis methyltransferase UbiE
13_1_40cm_4_scaffold_1142_11
R_Acidobacteria_65_29, Acidobacteria, Bacteria

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comp(12187..13239)
DNA (1053bp) protein (351aa)
ATP-dependent DNA ligase; K01971 DNA ligase (ATP) [EC:6.5.1.1] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
ATP-dependent DNA ligase-like protein n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5XX07_RAMTT
ATP-dependent DNA ligase
Displaying 11 items

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