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13_1_40cm_4_scaffold_1143

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_1143_1
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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3..842
DNA (840bp) protein (280aa)
Glutamate-aspartate carrier protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A970_GEMAT
gltP; glutamate-aspartate carrier protein
Glutamate-aspartate carrier protein {ECO:0000313|EMBL:BAH39047.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiac
13_1_40cm_4_scaffold_1143_2
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

934..1200
DNA (267bp) protein (89aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_1_40cm_4_scaffold_1143_3

Not on your lists

comp(1216..1830)
DNA (615bp) protein (205aa)
phosphoesterase PA-phosphatase-like protein id=1251117 bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
Phosphoesterase PA-phosphatase-like protein {ECO:0000313|EMBL:EQB63980.1}; TaxID=1379698 species="Bacteria.;" source="candidate division Zixibacteria bacterium RBG-1.;"
phosphoesterase PA-phosphatase related protein
13_1_40cm_4_scaffold_1143_4
unknown

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comp(1975..2166)
DNA (192bp) protein (64aa)

This feature has no annotations

13_1_40cm_4_scaffold_1143_5
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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2265..3050
DNA (786bp) protein (262aa)
Hypothetical membrane protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6A9_GEMAT
hypothetical membrane protein; K06872 uncharacterized protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
protein of unknown function DUF477
13_1_40cm_4_scaffold_1143_6
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

3053..3343
DNA (291bp) protein (97aa)
hypothetical protein
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_1_40cm_4_scaffold_1143_7
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

3405..3716
DNA (312bp) protein (104aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_1_40cm_4_scaffold_1143_8
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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3713..4288
DNA (576bp) protein (192aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6B1_GEMAT
LemA family protein
LemA family protein {ECO:0000313|EMBL:AHG90182.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_4_scaffold_1143_9
RBG_13_Ignavibacteria_36_8_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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comp(4295..4978)
DNA (684bp) protein (228aa)
two component LuxR family transcriptional regulator Tax=RBG_13_Ignavibacteria_36_8_curated
two-component system response regulator id=717628 bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria
LuxR family transcriptional regulator
13_1_40cm_4_scaffold_1143_10
unknown

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5158..5346
DNA (189bp) protein (63aa)

This feature has no annotations

13_1_40cm_4_scaffold_1143_11
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(5404..5613)
DNA (210bp) protein (70aa)
Cold shock protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9Q1_GEMAT
Cold-shock protein DNA-binding protein
Cold-shock protein DNA-binding protein {ECO:0000313|EMBL:AHG89448.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_4_scaffold_1143_12
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(5627..5803)
DNA (177bp) protein (59aa)
30S ribosomal protein S21 n=1 Tax=Spirulina subsalsa RepID=UPI00031AFC34
30S ribosomal protein S21 Tax=RBG_16_Gemmatimonadetes_66_8_curated
30S ribosomal protein S21
13_1_40cm_4_scaffold_1143_13
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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6023..8803
DNA (2781bp) protein (927aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_40cm_4_scaffold_1143_14
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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8968..9531
DNA (564bp) protein (188aa)
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein id=14428812 bin=bin3_NC10 species=Nitrosospira sp. APG3 genus=Nitrosospira taxon_order=Nitrosomonadales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
13_1_40cm_4_scaffold_1143_15
CSP1_5_NC10, NC10, Bacteria

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comp(9536..11170)
DNA (1635bp) protein (545aa)
diguanylate cyclase id=14428813 bin=bin3_NC10 species=Nitrosospira sp. APG3 genus=Nitrosospira taxon_order=Nitrosomonadales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
diguanylate cyclase Tax=CSP1_5_NC10
diguanylate cyclase
13_1_40cm_4_scaffold_1143_16
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

Not on your lists

11288..12865
DNA (1578bp) protein (526aa)
Amidase n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MX51_CORCM
gatA2; amidase Tax=RBG_13_Acidobacteria_68_16_curated
gatA2; amidase
13_1_40cm_4_scaffold_1143_17
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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comp(12857..14041)
DNA (1185bp) protein (395aa)
Predicted membrane protein n=1 Tax=Hahella chejuensis (strain KCTC 2396) RepID=Q2SN04_HAHCH id=5223413 bin=16ft_combo_ws3_JS1 species=Hahella chejuensis genus=Hahella taxon_order=Oceanospirillales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
hypothetical protein Tax=RBG_16_RIF_WS3X_71_46_curated
conserved hypothetical protein
13_1_40cm_4_scaffold_1143_18
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

14072..16228
DNA (2157bp) protein (719aa)
TonB-dependent outer membrane transport protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7Q7_GEMAT
TonB-dependent outer membrane transport protein
TonB-dependent outer membrane transport protein {ECO:0000313|EMBL:BAH38267.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimon
13_1_40cm_4_scaffold_1143_19
Anabaena cylindrica, Anabaena, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(16225..17595)
DNA (1371bp) protein (457aa)
Tyrosine decarboxylase (EC:4.1.1.25)
Tyrosine decarboxylase {ECO:0000313|EMBL:AFZ60767.1}; EC=4.1.1.25 {ECO:0000313|EMBL:AFZ60767.1};; TaxID=272123 species="Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Anabaena.;" source="Anabaena c
Tyrosine decarboxylase n=1 Tax=Anabaena cylindrica (strain ATCC 27899 / PCC 7122) RepID=K9ZQF9_ANACC
13_1_40cm_4_scaffold_1143_20
RBG_16_Chloroflexi_54_18_curated, Chloroflexi, Bacteria

Not on your lists

comp(17579..18706)
DNA (1128bp) protein (376aa)
Gll3435 protein n=1 Tax=Gloeobacter violaceus (strain PCC 7421) RepID=Q7NFT9_GLOVI
hypothetical protein; K00479 Rieske 2Fe-2S family protein Tax=RBG_16_Chloroflexi_54_18_curated
hypothetical protein
13_1_40cm_4_scaffold_1143_21
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18710..20143)
DNA (1434bp) protein (478aa)
FAD dependent oxidoreductase Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
FAD dependent oxidoreductase id=14631624 bin=bin9_gal15 tax=bin9_gal15 organism_group=GAL15
FAD dependent oxidoreductase
13_1_40cm_4_scaffold_1143_22
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(20140..21681)
DNA (1542bp) protein (514aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI0003662359
FAD dependent oxidoreductase Tax=GWC2_Gemmatimonadetes_71_10_curated
FAD dependent oxidoreductase
13_1_40cm_4_scaffold_1143_23
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21681..22877)
DNA (1197bp) protein (399aa)
glycine cleavage T protein (aminomethyl transferase); K00605 aminomethyltransferase [EC:2.1.2.10] Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
hypothetical protein n=1 Tax=SAR406 cluster bacterium SCGC AB-629-J13 RepID=UPI00035EAA9A
glycine cleavage T protein (aminomethyl transferase)
13_1_40cm_4_scaffold_1143_24
Marichromatium purpuratum, Marichromatium, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22936..23679
DNA (744bp) protein (248aa)
Putative uncharacterized protein n=1 Tax=Marichromatium purpuratum 984 RepID=F9TVY7_MARPU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHF03382.1}; TaxID=765910 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Marichromatium.;" source="Marichromatium purpur
13_1_40cm_4_scaffold_1143_25
unknown

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23736..24947
DNA (1212bp) protein (404aa)

This feature has no annotations

13_1_40cm_4_scaffold_1143_26
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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24956..27016
DNA (2061bp) protein (687aa)
Peptidase S9 prolyl oligopeptidase active site domain protein n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MDI5_RHOM4
peptidase S9 prolyl oligopeptidase active site domain-containing protein
Peptidase S9 prolyl oligopeptidase active site domain protein {ECO:0000313|EMBL:ACY47178.1}; Flags: Precursor;; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; R
13_1_40cm_4_scaffold_1143_27
RBG_13_OP8X_37_8_curated, OP8X, Bacteria

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comp(27013..27453)
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Psychromonas ingrahamii (strain 37) RepID=A1SUG6_PSYIN
hypothetical protein Tax=RBG_13_OP8X_37_8_curated
hypothetical protein
13_1_40cm_4_scaffold_1143_28
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

27537..28091
DNA (555bp) protein (185aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01WS8_SOLUE
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
hypothetical protein
Displaying 28 items

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