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13_1_40cm_4_scaffold_12431

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_12431_1
RBG_13_ACD39_59_9_curated, ACD39, Bacteria

Not on your lists

comp(1..708)
DNA (708bp) protein (236aa)
Uncharacterized protein n=1 Tax=Desulfococcus multivorans DSM 2059 RepID=S7TNQ3_DESML
hypothetical protein Tax=RBG_13_ACD39_59_9_curated
yfhR_[C]; alpha/beta hydrolase fold containing protein
13_1_40cm_4_scaffold_12431_2
unknown

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747..1136
DNA (390bp) protein (130aa)

This feature has no annotations

13_1_40cm_4_scaffold_12431_3
Halorubrum californiense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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1085..1603
DNA (519bp) protein (173aa)
ADP-ribosyl-(Dinitrogen reductase) hydrolase n=1 Tax=Halorubrum californiensis DSM 19288 RepID=M0E3J6_9EURY
ADP-ribosyl-(Dinitrogen reductase) hydrolase {ECO:0000313|EMBL:ELZ41497.1}; TaxID=1227465 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum
ADP-ribosylglycohydrolase
13_1_40cm_4_scaffold_12431_4
unknown

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comp(1605..2135)
DNA (531bp) protein (177aa)

This feature has no annotations

13_1_40cm_4_scaffold_12431_5
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

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comp(2204..2404)
DNA (201bp) protein (67aa)
cold-shock DNA-binding domain-containing protein; K03704 cold shock protein (beta-ribbon, CspA family) Tax=RBG_16_Actinobacteria_67_10_curated
cold-shock protein
Cold-shock DNA-binding domain protein id=2785126 bin=GWF2_Methylomirabilis_70_14 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_4_scaffold_12431_6
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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2730..4712
DNA (1983bp) protein (661aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4M8_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAH37188.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-
13_1_40cm_4_scaffold_12431_7
unknown

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comp(4724..5293)
DNA (570bp) protein (190aa)

This feature has no annotations

13_1_40cm_4_scaffold_12431_8
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(6545..7786)
DNA (1242bp) protein (414aa)
Glycerol-3-phosphate O-acyltransferase n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WNR6_9BURK
glycerol-3-phosphate acyltransferase Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
glycerol-3-phosphate O-acyltransferase
13_1_40cm_4_scaffold_12431_9
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(7870..8910)
DNA (1041bp) protein (347aa)
HtpX-2 peptidase; K03799 heat shock protein HtpX [EC:3.4.24.-] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Protease HtpX homolog id=2725088 bin=GWC2_Ignavibacteria_56_12 species=Rubrobacter xylanophilus genus=Rubrobacter taxon_order=Rubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome
htpX; heat shock protein HtpX
13_1_40cm_4_scaffold_12431_10
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(8928..9443)
DNA (516bp) protein (172aa)
LemA family protein; K03744 LemA protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
LemA family protein id=1843427 bin=GWB2_Proteobacteria_55_19 species=Thermosipho africanus genus=Thermosipho taxon_order=Thermotogales taxon_class=Thermotogae phylum=Thermotogae tax=GWB2_Proteobacteria_55_19 organism_group=Proteobacteria organism_desc=Good
LemA family protein
13_1_40cm_4_scaffold_12431_11
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(9507..10148)
DNA (642bp) protein (214aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4S8_GEMAT
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
13_1_40cm_4_scaffold_12431_12
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(10145..10561)
DNA (417bp) protein (139aa)
multi-sensor hybrid histidine kinase (EC:2.7.13.3)
PAS/PAC sensor hybrid histidine kinase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D4R9_9BACT
PAS/PAC sensor hybrid histidine kinase Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_40cm_4_scaffold_12431_13
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(10558..11184)
DNA (627bp) protein (209aa)
AraC family transcriptional regulator n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A650_GEMAT
AraC family transcriptional regulator Tax=RBG_16_Gemmatimonadetes_66_8_curated
AraC family transcriptional regulator
Displaying 13 items

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