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13_1_40cm_4_scaffold_2125

Search features with annotation key words

Displaying items 1-30 of 63 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_2125_1
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..1047
DNA (1047bp) protein (349aa)
General substrate transporter n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QQ97_NITHX
general substrate transporter
General substrate transporter {ECO:0000313|EMBL:ABE61600.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter ham
13_1_40cm_4_scaffold_2125_2
BJP_S1_SUB10_Methylophilales_55_32, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1124..1579)
DNA (456bp) protein (152aa)
hypothetical protein n=1 Tax=Arthrobacter sp. 162MFSha1.1 RepID=UPI0003806F39
ycdZ; inner membrane protein ycdZ
Tax=BJP_S1_SUB10_Methylophilales_55_32
13_1_40cm_4_scaffold_2125_3
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

comp(1796..2401)
DNA (606bp) protein (202aa)
Putative two-component response regulator n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I1B7_CALAS
two component LuxR family transcriptional regulator Tax=RBG_16_Chloroflexi_63_12_curated
putative two-component response regulator
13_1_40cm_4_scaffold_2125_4
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

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comp(2412..3098)
DNA (687bp) protein (229aa)
Putative two-component histidine kinase n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I1B6_CALAS
histidine kinase Tax=RBG_16_Chloroflexi_63_12_curated
putative two-component histidine kinase
13_1_40cm_4_scaffold_2125_5
BJP_S1_SUB10_Methylophilales_55_32, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3095..3562)
DNA (468bp) protein (156aa)
Tax=BJP_S1_SUB10_Methylophilales_55_32
13_1_40cm_4_scaffold_2125_6
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(3559..5481)
DNA (1923bp) protein (641aa)
glucosamine-6-phosphate deaminase-like protein; K02564 glucosamine-6-phosphate deaminase [EC:3.5.99.6] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Putative glucosamine-6-phosphate isomerase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A967_GEMAT
glucosamine-6-phosphate isomerase
13_1_40cm_4_scaffold_2125_7
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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5687..6832
DNA (1146bp) protein (382aa)
Sensory box sensor histidine kinase n=1 Tax=Myxococcus fulvus (strain ATCC BAA-855 / HW-1) RepID=F8CHI1_MYXFH
PAS/PAC sensor signal transduction histidine kinase Tax=RBG_16_Gemmatimonadetes_66_8_curated
sensory box sensor histidine kinase
13_1_40cm_4_scaffold_2125_8
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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6843..8387
DNA (1545bp) protein (515aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI00031DFAC0
peptidase M28 Tax=RBG_16_Gemmatimonadetes_66_8_curated
peptidase M28
13_1_40cm_4_scaffold_2125_9
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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comp(8395..8874)
DNA (480bp) protein (160aa)
Glyoxalase n=1 Tax=Hyphomicrobium nitrativorans NL23 RepID=V5SBI4_9RHIZ
glyoxalase/bleomycin resistance protein/dioxygenase; K07104 Tax=RBG_16_Gemmatimonadetes_66_8_curated
glyoxalase
13_1_40cm_4_scaffold_2125_10
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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8988..9323
DNA (336bp) protein (112aa)
delta-1-pyrroline-5-carboxylate dehydrogenase (EC:1.5.1.12); K00294 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.1.12] Tax=RBG_16_Gemmatimonadetes_66_8_curated
delta-1-pyrroline-5-carboxylate dehydrogenase (EC:1.5.1.12)
Delta-1-pyrroline-5-carboxylate dehydrogenase n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2IP72_ANADE
13_1_40cm_4_scaffold_2125_11
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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9304..10620
DNA (1317bp) protein (439aa)
Delta-1-pyrroline-5-carboxylate dehydrogenase n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MI13_RHOM4
delta-1-pyrroline-5-carboxylate dehydrogenase
Delta-1-pyrroline-5-carboxylate dehydrogenase {ECO:0000313|EMBL:ACY48121.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" sou
13_1_40cm_4_scaffold_2125_12
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

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10617..11222
DNA (606bp) protein (202aa)
hypothetical protein Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
13_1_40cm_4_scaffold_2125_13
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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comp(11279..11455)
DNA (177bp) protein (59aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2B6K0_9BACT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
hypothetical protein
13_1_40cm_4_scaffold_2125_14
Cupriavidus necator, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(11566..11805)
DNA (240bp) protein (80aa)
Uncharacterized protein n=1 Tax=Cupriavidus necator (strain ATCC 43291 / DSM 13513 / N-1) RepID=F8GT70_CUPNN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI79907.1}; TaxID=1042878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus necato
13_1_40cm_4_scaffold_2125_15
RBG_16_Chloroflexi_64_32_curated, Chloroflexi, Bacteria

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11913..13454
DNA (1542bp) protein (514aa)
hypothetical protein; K06888 Tax=RBG_16_Chloroflexi_64_32_curated
Putative uncharacterized protein id=5017121 bin=GWA2_Ignavibacteria_55_11 species=Candidatus Koribacter versatilis genus=Candidatus Koribacter taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
N-acylglucosamine 2-epimerase
13_1_40cm_4_scaffold_2125_16
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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13530..14078
DNA (549bp) protein (183aa)
RNA polymerase ECF-type sigma factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5K6_GEMAT
RNA polymerase sigma factor, sigma-70 family
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:AHG92078.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_4_scaffold_2125_17
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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14075..14686
DNA (612bp) protein (204aa)
Glycoside hydrolase, family 13 domain protein n=1 Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LQ53_SYNFM
glycoside hydrolase family protein Tax=GWC2_Gemmatimonadetes_71_10_curated
glycoside hydrolase family 13 protein
13_1_40cm_4_scaffold_2125_18
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

14686..15357
DNA (672bp) protein (224aa)
hypothetical protein
hypothetical protein Tax=GWC2_Gemmatimonadetes_71_10_curated
13_1_40cm_4_scaffold_2125_19
unknown

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15468..15680
DNA (213bp) protein (71aa)

This feature has no annotations

13_1_40cm_4_scaffold_2125_20
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(15690..16931)
DNA (1242bp) protein (414aa)
arginine biosynthesis bifunctional protein ArgJ (EC:2.3.1.1); K00620 glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1] Tax=RBG_16_Gemmatimonadetes_66_8_curated
rca:Rcas_3355 arginine biosynthesis bifunctional protein ArgJ (EC:2.3.1.1); K00620 glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1] id=1246557 bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
arginine biosynthesis bifunctional protein ArgJ (EC:2.3.1.1)
13_1_40cm_4_scaffold_2125_21
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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17018..18136
DNA (1119bp) protein (373aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AA53_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Tetratricopeptide TPR_1 repeat-containing protein
13_1_40cm_4_scaffold_2125_22
RHI_OD1_Kaiserbacteria_53_13, Kaiserbacteria, Parcubacteria, Bacteria

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comp(18185..18574)
DNA (390bp) protein (130aa)
Hypothetical conserved protein n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5SRP8_9BACT
DoxX family protein; K15977 putative oxidoreductase Tax=RIFCSPHIGHO2_12_FULL_OD1_Kaiserbacteria_53_13_curated
putative integral membrane protein
13_1_40cm_4_scaffold_2125_23
unknown

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comp(18571..18936)
DNA (366bp) protein (122aa)
S-adenosylmethionine decarboxylase
13_1_40cm_4_scaffold_2125_24
unknown

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comp(18933..20099)
DNA (1167bp) protein (389aa)

This feature has no annotations

13_1_40cm_4_scaffold_2125_25
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(20206..20664)
DNA (459bp) protein (153aa)
Cyclic nucleotide-binding domain-containing protein n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MHI7_CORCM
cyclic nucleotide-binding domain-containing protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
cyclic nucleotide-binding domain-containing protein
13_1_40cm_4_scaffold_2125_26
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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20677..21231
DNA (555bp) protein (185aa)
pgsA2; CDP-alcohol phosphatidyltransferase; K00995 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] Tax=GWC2_Gemmatimonadetes_71_10_curated
CDP-alcohol phosphatidyltransferase family protein n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MUZ5_CORCM
pgsA2; CDP-alcohol phosphatidyltransferase
13_1_40cm_4_scaffold_2125_27
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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21228..21758
DNA (531bp) protein (177aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_40cm_4_scaffold_2125_28
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

21760..22170
DNA (411bp) protein (137aa)
OsmC family protein n=1 Tax=Oscillochloris trichoides DG-6 RepID=E1IEP3_9CHLR
hypothetical protein; K07397 putative redox protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
13_1_40cm_4_scaffold_2125_29
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

22175..22636
DNA (462bp) protein (154aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
13_1_40cm_4_scaffold_2125_30
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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comp(22688..22957)
DNA (270bp) protein (90aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AA48_GEMAT
hypothetical protein Tax=GWC2_Gemmatimonadetes_71_10_curated
hypothetical protein
Displaying items 1-30 of 63 in total

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