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13_1_40cm_4_scaffold_22572

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_22572_1
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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3..482
DNA (480bp) protein (160aa)
alpha-galactosidase (EC:3.2.1.22); K07407 alpha-galactosidase [EC:3.2.1.22] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Conserved domain protein n=1 Tax=Bacteroides clarus CAG:160 RepID=R6LJW4_9BACE
13_1_40cm_4_scaffold_22572_2
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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comp(479..1291)
DNA (813bp) protein (271aa)
binding-protein-dependent transporters inner membrane component; K02026 multiple sugar transport system permease protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
ABC-type sugar transport system, permease component id=4214566 bin=GWA2_Ignavibacteria_55_11 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
sugar ABC transporter permease
13_1_40cm_4_scaffold_22572_3
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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comp(1275..3116)
DNA (1842bp) protein (614aa)
sugar ABC transporter permease Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Permease component of ABC-type sugar transporter id=4214564 bin=GWA2_Ignavibacteria_55_11 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
sugar ABC transporter permease
13_1_40cm_4_scaffold_22572_4
Burkholderia sp. RPE64, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3113..3460)
DNA (348bp) protein (116aa)
Spermidine/putrescine import ATP-binding protein potA n=1 Tax=Burkholderia sp. RPE64 RepID=R4X0N3_9BURK
ABC transporter
Spermidine/putrescine import ATP-binding protein potA {ECO:0000313|EMBL:BAN25641.1}; TaxID=758793 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia
13_1_40cm_4_scaffold_22572_5
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

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comp(3457..4137)
DNA (681bp) protein (227aa)
ABC transporter related protein n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C5T8_SPHTD
ABC transporter
ABC transporter related protein {ECO:0000313|EMBL:ACZ39490.1}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.
13_1_40cm_4_scaffold_22572_6
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(4150..4842)
DNA (693bp) protein (231aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
hypothetical protein SclubSA_04243 id=2073410 bin=GWD2_Deltaproteobacteria_55_8 species=SAR324 cluster bacterium SCGC AAA001-C10 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein
13_1_40cm_4_scaffold_22572_7
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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4952..5611
DNA (660bp) protein (220aa)
sodA; Superoxide dismutase; K04564 superoxide dismutase, Fe-Mn family [EC:1.15.1.1] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Superoxide dismutase n=1 Tax=Anoxybacillus sp. DT3-1 RepID=M5R7E5_9BACI
sodA; Superoxide dismutase
13_1_40cm_4_scaffold_22572_8
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5623..6045)
DNA (423bp) protein (141aa)
Response regulator n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9F147_SORC5
response regulator
Response regulator {ECO:0000313|EMBL:CAN91331.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulo
13_1_40cm_4_scaffold_22572_9
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(6117..6362)
DNA (246bp) protein (82aa)
hypothetical protein n=2 Tax=Xanthomonas RepID=UPI00034942B3
Cysteine-rich CPXCG protein
Cysteine-rich CPXCG protein {ECO:0000313|EMBL:AHG91532.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_4_scaffold_22572_10
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(6365..6895)
DNA (531bp) protein (177aa)
DinB superfamily {ECO:0000313|EMBL:CDM66153.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
DinB-like domain protein
Putative metal-dependent hydrolase yfiT id=2225161 bin=GWA2_Ignavibacteria_55_11 species=Deinococcus peraridilitoris genus=Deinococcus taxon_order=Deinococcales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
13_1_40cm_4_scaffold_22572_11
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(6892..7494)
DNA (603bp) protein (201aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A825_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAH38385.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-
13_1_40cm_4_scaffold_22572_trna_1
unknown

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comp(7564..7636)
DNA (73bp)
transferRNA
13_1_40cm_4_scaffold_22572_12

Not on your lists

comp(7719..8714)
DNA (996bp) protein (332aa)
Uncharacterized protein {ECO:0000313|EMBL:KKM78008.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Displaying 13 items

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