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13_1_40cm_4_scaffold_2441

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_2441_1
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(2..1375)
DNA (1374bp) protein (458aa)
nitrate reductase id=24509602 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Stigmatella aurantiaca genus=Stigmatella taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
nitrate reductase Tax=RBG_16_RIF_WS3X_71_46_curated
nitrate reductase
13_1_40cm_4_scaffold_2441_2
RBG_16_Zixibacteria_53_22_curated, Zixibacteria, Bacteria

Not on your lists

comp(1372..2658)
DNA (1287bp) protein (429aa)
putative aminotransferase; K00823 4-aminobutyrate aminotransferase [EC:2.6.1.19] Tax=RBG_16_Zixibacteria_53_22_curated
Aminotransferase n=2 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=E3FRM2_STIAD id=5225712 bin=16ft_combo_ws3_JS1 species=Stigmatella aurantiaca genus=Stigmatella taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
alanine--glyoxylate transaminase
13_1_40cm_4_scaffold_2441_3
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(2665..4050)
DNA (1386bp) protein (462aa)
Dihydropyrimidinase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XKX9_9BACT
Dihydropyrimidinase {ECO:0000313|EMBL:EEF59473.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedospha
dihydropyrimidinase
13_1_40cm_4_scaffold_2441_4
RBG_16_Armatimonadetes_67_12_curated, Armatimonadetes, Bacteria

Not on your lists

comp(4038..4520)
DNA (483bp) protein (161aa)
hypothetical protein Tax=RBG_16_Armatimonadetes_67_12_curated
hypothetical protein id=14633044 bin=bin9_gal15 species=16ft_combo_ws3 genus=16ft_combo_ws3 taxon_order=16ft_combo_ws3 taxon_class=16ft_combo_ws3 phylum=WS3 tax=bin9_gal15 organism_group=GAL15
hypothetical protein
13_1_40cm_4_scaffold_2441_5
RBG_16_Acidobacteria_68_9_curated, Acidobacteria, Bacteria

Not on your lists

comp(4521..5390)
DNA (870bp) protein (290aa)
hypothetical protein; K12251 N-carbamoylputrescine amidase [EC:3.5.1.53] Tax=RBG_16_Acidobacteria_68_9_curated
B-alanine synthase n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q097R1_STIAD
beta-alanine synthase
13_1_40cm_4_scaffold_2441_6
RBG_16_Acidobacteria_68_9_curated, Acidobacteria, Bacteria

Not on your lists

comp(5390..6835)
DNA (1446bp) protein (482aa)
mmsA; methylmalonate-semialdehyde dehydrogenase (EC:1.2.1.27); K00140 malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] Tax=RBG_16_Ac
mmsA; methylmalonate-semialdehyde dehydrogenase (EC:1.2.1.27)
Methylmalonate-semialdehyde dehydrogenase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GKD5_SORC5
13_1_40cm_4_scaffold_2441_7
Bacillus methanolicus, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(6866..8182)
DNA (1317bp) protein (439aa)
aceA; Isocitrate lyase (EC:4.1.3.1)
Isocitrate lyase {ECO:0000313|EMBL:AIE58821.1}; EC=4.1.3.1 {ECO:0000313|EMBL:AIE58821.1};; TaxID=796606 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus me
Isocitrate lyase n=1 Tax=Bacillus methanolicus MGA3 RepID=I3E3N5_BACMT
13_1_40cm_4_scaffold_2441_8
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(8166..8972)
DNA (807bp) protein (269aa)
malate synthase (EC:2.3.3.9); K01638 malate synthase [EC:2.3.3.9] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
malate synthase (EC:2.3.3.9)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI000382ADD8
13_1_40cm_4_scaffold_2441_9
unknown

Not on your lists

9043..9960
DNA (918bp) protein (306aa)

This feature has no annotations

13_1_40cm_4_scaffold_2441_10
CSP1_4_Chloroflexi, Gitt-GS-136, Chloroflexi, Bacteria

Not on your lists

10048..12192
DNA (2145bp) protein (715aa)
molybdopterin binding aldehyde oxidase and xanthine dehydrogenase protein id=14629629 bin=bin8_Chloro species=16ft_combo_ws3 genus=16ft_combo_ws3 taxon_order=16ft_combo_ws3 taxon_class=16ft_combo_ws3 phylum=WS3 tax=bin8_Chloro organism_group=Chloroflexi
molybdopterin binding aldehyde oxidase and xanthine dehydrogenase protein Tax=CSP1_4_Chloroflexi
aldehyde oxidase and xanthine dehydrogenase molybdopterin binding protein
13_1_40cm_4_scaffold_2441_11
Terriglobus roseus, Terriglobus, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

12177..12623
DNA (447bp) protein (149aa)
Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS-like protein n=1 Tax=Terriglobus roseus (strain DSM 18391 / NRRL B-41598 / KBS 63) RepID=I3ZD58_TERRK
aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS-like protein
Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS-like protein {ECO:0000313|EMBL:AFL87176.1}; TaxID=926566 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Terr
13_1_40cm_4_scaffold_2441_12
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

Not on your lists

12719..13417
DNA (699bp) protein (233aa)
FAD-binding molybdopterin dehydrogenase protein Tax=RBG_16_RIF_CHLX_72_14_curated
molybdopterin dehydrogenase FAD-binding protein
FAD-binding molybdopterin dehydrogenase protein id=14629627 bin=bin8_Chloro species=16ft_combo_ws3 genus=16ft_combo_ws3 taxon_order=16ft_combo_ws3 taxon_class=16ft_combo_ws3 phylum=WS3 tax=bin8_Chloro organism_group=Chloroflexi
13_1_40cm_4_scaffold_2441_13
Desulfococcus oleovorans, Desulfococcus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13501..13878
DNA (378bp) protein (126aa)
Uncharacterized protein n=1 Tax=Desulfococcus oleovorans (strain DSM 6200 / Hxd3) RepID=A8ZXQ3_DESOH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABW67011.1}; TaxID=96561 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfococcus.;" source="Desulfococcus
13_1_40cm_4_scaffold_2441_14
R_Ignavibacteria_55_14, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(13885..14235)
DNA (351bp) protein (117aa)
hypothetical protein
Uncharacterized protein id=4169652 bin=GWA2_Ignavibacteria_55_11 species=Pontibacter sp. BAB1700 genus=Pontibacter taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
Uncharacterized protein Tax=RIFCSPLOWO2_02_FULL_Ignavibacteria_55_14_curated
Displaying 14 items

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