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13_1_40cm_4_scaffold_29971

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_29971_1

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3..563
DNA (561bp) protein (187aa)
Cyclase n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7ULL4_MYXSD
Marine sediment metagenome DNA, contig: S01H1_C00387 {ECO:0000313|EMBL:GAF76563.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
cyclase
13_1_40cm_4_scaffold_29971_2
Janthinobacterium sp. HH01, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(550..2961)
DNA (2412bp) protein (804aa)
Beta-hexosaminidase Hex {ECO:0000313|EMBL:ELX09730.1}; EC=3.2.1.52 {ECO:0000313|EMBL:ELX09730.1};; TaxID=1198452 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteracea
hypothetical protein n=1 Tax=Oxalobacteraceae bacterium AB_14 RepID=UPI0003801F88
beta-N-acetylhexosaminidase
13_1_40cm_4_scaffold_29971_3
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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2999..3853
DNA (855bp) protein (285aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI0003817712
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG88149.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_4_scaffold_29971_4
Fibrella aestuarina, Fibrella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(3850..4758)
DNA (909bp) protein (303aa)
Uncharacterized protein n=1 Tax=Fibrella aestuarina BUZ 2 RepID=I0KBA2_9BACT
protein of unknown function DUF1684
Uncharacterized protein {ECO:0000313|EMBL:CCH01405.1}; TaxID=1166018 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrella.;" source="Fibrella aestuarina BUZ 2.;"
13_1_40cm_4_scaffold_29971_5
Streptomonospora alba, Streptomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

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comp(4755..5168)
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Stackebrandtia nassauensis (strain DSM 44728 / NRRL B-16338 / NBRC 102104 / LLR-40K-21) RepID=D3Q3D3_STANL
Uncharacterized protein {ECO:0000313|EMBL:KII00226.1}; TaxID=183763 species="Bacteria; Actinobacteria; Streptosporangiales; Nocardiopsaceae; Streptomonospora.;" source="Streptomonospora alba.;"
hypothetical protein
13_1_40cm_4_scaffold_29971_6
unknown

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comp(5170..5415)
DNA (246bp) protein (82aa)

This feature has no annotations

13_1_40cm_4_scaffold_29971_7
unknown

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comp(5454..5864)
DNA (411bp) protein (137aa)

This feature has no annotations

13_1_40cm_4_scaffold_29971_8
Gimesia maris, Gimesia, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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comp(5888..6229)
DNA (342bp) protein (114aa)
hypothetical protein n=1 Tax=BRC1 bacterium SCGC AAA252-M09 RepID=UPI000365D217
UPF0145 protein PM8797T_29778 {ECO:0000256|HAMAP-Rule:MF_00338}; TaxID=344747 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Gimesia.;" source="Gimesia maris D
hypothetical protein
13_1_40cm_4_scaffold_29971_9
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(6249..6521)
DNA (273bp) protein (91aa)
membrane protein n=1 Tax=Variovorax paradoxus RepID=UPI000372A9E8
Variovorax paradoxus strain MEDvA23 contig_71, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ25082.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamona
hypothetical protein
13_1_40cm_4_scaffold_29971_10
unknown

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comp(6635..6946)
DNA (312bp) protein (104aa)

This feature has no annotations

13_1_40cm_4_scaffold_29971_11
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(7032..8483)
DNA (1452bp) protein (484aa)
glycosidase (EC:3.2.1.-); K05349 beta-glucosidase [EC:3.2.1.21] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Glycosidase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6W9_GEMAT
glycoside hydrolase family 3 domain protein
13_1_40cm_4_scaffold_29971_12
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(8480..9535)
DNA (1056bp) protein (352aa)
anmK; anhydro-N-acetylmuramic acid kinase; K09001 anhydro-N-acetylmuramic acid kinase [EC:2.7.1.170] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Anhydro-N-acetylmuramic acid kinase n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9L4J5_THERP id=5224368 bin=16ft_combo_ws3_JS1 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
Anhydro-N-acetylmuramic acid kinase
Displaying 12 items

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