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13_1_40cm_4_scaffold_30459

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_30459_1
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

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1..630
DNA (630bp) protein (210aa)
LexA; SOS-response transcriptional repressors; K01356 repressor LexA [EC:3.4.21.88] id=24452028 bin=RBG_19FT_COMBO_GAL15_69_19 species=Pelotomaculum thermopropionicum genus=Pelotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
LexA; SOS-response transcriptional repressors; K01356 repressor LexA [EC:3.4.21.88] Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
SOS-response transcriptional repressor, LexA
13_1_40cm_4_scaffold_30459_2
unknown

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627..824
DNA (198bp) protein (66aa)

This feature has no annotations

13_1_40cm_4_scaffold_30459_3
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

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821..1312
DNA (492bp) protein (164aa)
id=24452026 Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
id=24452026 bin=RBG_19FT_COMBO_GAL15_69_19 tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
13_1_40cm_4_scaffold_30459_4
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

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1425..1946
DNA (522bp) protein (174aa)
hypothetical protein id=24452025 bin=RBG_19FT_COMBO_GAL15_69_19 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
hypothetical protein Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
hypothetical protein
13_1_40cm_4_scaffold_30459_5
CSP1_3_Armatimonadetes, Armatimonadetes, Bacteria

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comp(1903..3087)
DNA (1185bp) protein (395aa)
protease id=14631826 bin=bin9_gal15 species=Dehalococcoides mccartyi genus=Dehalococcoides taxon_order=Dehalococcoidales taxon_class=Dehalococcoidia phylum=Chloroflexi tax=bin9_gal15 organism_group=GAL15
protease Tax=CSP1_3_Armatimonadetes
protease
13_1_40cm_4_scaffold_30459_6
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

3130..3744
DNA (615bp) protein (205aa)
hypothetical protein; K07220 hypothetical protein Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
hypothetical protein; K07220 hypothetical protein id=24452024 bin=RBG_19FT_COMBO_GAL15_69_19 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
hypothetical protein
13_1_40cm_4_scaffold_30459_7
R_NC10_66_22, NC10, Bacteria

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3766..4770
DNA (1005bp) protein (335aa)
Phosphate/sulphate permease id=3122079 bin=GWF2_Methylomirabilis_70_14 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
phosphate/sulphate permease; K03306 inorganic phosphate transporter, PiT family Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
phosphate/sulphate permease
13_1_40cm_4_scaffold_30459_8
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

4969..5310
DNA (342bp) protein (114aa)
thioredoxin; K03671 thioredoxin 1 id=24452022 bin=RBG_19FT_COMBO_GAL15_69_19 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
thioredoxin; K03671 thioredoxin 1 Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
thioredoxin
13_1_40cm_4_scaffold_30459_9
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

comp(5469..5825)
DNA (357bp) protein (119aa)
thioredoxin reductase; K00384 thioredoxin reductase (NADPH) [EC:1.8.1.9] id=24452021 bin=RBG_19FT_COMBO_GAL15_69_19 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
thioredoxin reductase; K00384 thioredoxin reductase (NADPH) [EC:1.8.1.9] Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
trxB; thioredoxin reductase (EC:1.8.1.9)
13_1_40cm_4_scaffold_30459_10
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

6447..6755
DNA (309bp) protein (103aa)
MerR family transcriptional regulator; K13640 MerR family transcriptional regulator, heat shock protein HspR id=24452020 bin=RBG_19FT_COMBO_GAL15_69_19 species=Meiothermus ruber genus=Meiothermus taxon_order=Thermales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
MerR family transcriptional regulator; K13640 MerR family transcriptional regulator, heat shock protein HspR Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
MerR family transcriptional regulator
13_1_40cm_4_scaffold_30459_11
RBG_16_Armatimonadetes_67_12_curated, Armatimonadetes, Bacteria

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6752..7195
DNA (444bp) protein (148aa)
heat shock protein Hsp20; K13993 HSP20 family protein Tax=RBG_16_Armatimonadetes_67_12_curated
Heat shock protein Hsp20 id=14631413 bin=bin9_gal15 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin9_gal15 organism_group=GAL15
Heat shock protein Hsp20
13_1_40cm_4_scaffold_30459_12
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

7246..7527
DNA (282bp) protein (94aa)
dnaK; chaperone protein DnaK; K04043 molecular chaperone DnaK id=24452019 bin=RBG_19FT_COMBO_GAL15_69_19 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Chloroflexi tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
dnaK; chaperone protein DnaK; K04043 molecular chaperone DnaK Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
dnaK; chaperone protein DnaK
13_1_40cm_4_scaffold_30459_13
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

7524..9086
DNA (1563bp) protein (521aa)
dnaK; chaperone protein DnaK; K04043 molecular chaperone DnaK id=24452019 bin=RBG_19FT_COMBO_GAL15_69_19 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Chloroflexi tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
dnaK; chaperone protein DnaK; K04043 molecular chaperone DnaK Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
dnaK; chaperone protein DnaK
13_1_40cm_4_scaffold_30459_14
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

9086..9634
DNA (549bp) protein (183aa)
GrpE protein HSP-70 cofactor; K03687 molecular chaperone GrpE Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
Protein GrpE id=1804195 bin=GWB2_Proteobacteria_55_19 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Proteobacteria_55_19 organism_group=Proteobacteria organism_desc=Good
grpE; DnaJ adenine nucleotide exchange factor GrpE
13_1_40cm_4_scaffold_30459_15
CSP1_3_Armatimonadetes, Armatimonadetes, Bacteria

Not on your lists

9591..10571
DNA (981bp) protein (327aa)
CbpA; DnaJ-class molecular chaperone; K05516 curved DNA-binding protein id=14632222 bin=bin9_gal15 species=Pelotomaculum thermopropionicum genus=Pelotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin9_gal15 organism_group=GAL15
CbpA; DnaJ-class molecular chaperone; K05516 curved DNA-binding protein Tax=CSP1_3_Armatimonadetes
chaperone DnaJ domain-containing protein
13_1_40cm_4_scaffold_30459_16
CSP1_3_Armatimonadetes, Armatimonadetes, Bacteria

Not on your lists

10707..11141
DNA (435bp) protein (145aa)
ATP-dependent chaperone ClpB id=14632221 bin=bin9_gal15 species=Chthonomonas calidirosea genus=Chthonomonas taxon_order=Chthonomonadales taxon_class=Chthonomonadetes phylum=Armatimonadetes tax=bin9_gal15 organism_group=GAL15
ATP-dependent chaperone ClpB Tax=CSP1_3_Armatimonadetes
ATP-dependent chaperone ClpB
13_1_40cm_4_scaffold_30459_17
RBG_16_Armatimonadetes_67_12_curated, Armatimonadetes, Bacteria

Not on your lists

11090..12142
DNA (1053bp) protein (351aa)
ATP-dependent chaperone ClpB; K03695 ATP-dependent Clp protease ATP-binding subunit ClpB Tax=RBG_16_Armatimonadetes_67_12_curated
ATP-dependent chaperone ClpB id=14632221 bin=bin9_gal15 species=Chthonomonas calidirosea genus=Chthonomonas taxon_order=Chthonomonadales taxon_class=Chthonomonadetes phylum=Armatimonadetes tax=bin9_gal15 organism_group=GAL15
ATP-dependent chaperone ClpB
Displaying 17 items

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