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13_1_40cm_4_scaffold_3964

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_3964_1
RBG_13_Deltaproteobacteria_65_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..314)
DNA (312bp) protein (104aa)
RND family efflux transporter MFP subunit; K07798 Cu(I)/Ag(I) efflux system membrane protein CusB Tax=RBG_13_Deltaproteobacteria_65_10_curated
Efflux transporter, RND family, MFP subunit id=1905733 bin=GWD2_Deltaproteobacteria_55_8 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
RND family efflux transporter MFP subunit; K07798 Cu(I)/Ag(I) efflux system membrane protein CusB
13_1_40cm_4_scaffold_3964_2
RBG_13_Deltaproteobacteria_61_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(311..1591)
DNA (1281bp) protein (427aa)
outer membrane efflux protein Tax=RBG_13_Deltaproteobacteria_61_14_curated
Outer membrane efflux protein id=8266272 bin=CD_OP8_4m species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CD_OP8_4m organism_group=OP8 (Aminicenantes)
outer membrane efflux protein
13_1_40cm_4_scaffold_3964_3
Algoriphagus machipongonensis, Algoriphagus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(2068..2745)
DNA (678bp) protein (226aa)
Putative Tat (Twin-arginine translocation) pathway signal sequence containing protein n=1 Tax=Algoriphagus machipongonensis RepID=A3I0W9_9BACT
Putative Tat (Twin-arginine translocation) pathway signal sequence containing protein {ECO:0000313|EMBL:EAZ80115.1}; TaxID=388413 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacte
hypothetical protein
13_1_40cm_4_scaffold_3964_4
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(2768..3376)
DNA (609bp) protein (203aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ACE7_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
hypothetical protein
13_1_40cm_4_scaffold_3964_5
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(3392..5077)
DNA (1686bp) protein (562aa)
Putative oxidoreductase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ACE6_GEMAT
GMC oxidoreductase
GMC oxidoreductase {ECO:0000313|EMBL:AHG92304.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_4_scaffold_3964_6
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

5191..6825
DNA (1635bp) protein (545aa)
Peptidase S9, prolyl oligopeptidase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IQB9_KORVE
Dipeptidyl aminopeptidase/acylaminoacyl peptidase {ECO:0000313|EMBL:CDM66660.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylal
peptidase S9, prolyl oligopeptidase
13_1_40cm_4_scaffold_3964_7
R_Elusimicrobia_57_9, Elusimicrobia, Bacteria

Not on your lists

6825..7070
DNA (246bp) protein (82aa)
hypothetical protein n=1 Tax=Kushneria aurantia RepID=UPI00037AD3B2
peptidase S9 prolyl oligopeptidase Tax=RIFCSPHIGHO2_02_FULL_Elusimicrobia_57_9_curated
hypothetical protein
13_1_40cm_4_scaffold_3964_8
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

7076..7975
DNA (900bp) protein (300aa)
5'-3' exonuclease n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1INX5_KORVE
5'-3' exonuclease Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
5'-3' exonuclease
13_1_40cm_4_scaffold_3964_9
Bacillus azotoformans, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(7891..8337)
DNA (447bp) protein (149aa)
NADPH-dependent 7-cyano-7-deazaguanine reductase {ECO:0000256|HAMAP-Rule:MF_00818, ECO:0000256|SAAS:SAAS00184002}; EC=1.7.1.13 {ECO:0000256|HAMAP-Rule:MF_00818, ECO:0000256|SAAS:SAAS00001352};; 7-cyan
7-cyano-7-deazaguanine reductase n=1 Tax=Alkalibacillus haloalkaliphilus RepID=UPI00031745C2
7-cyano-7-deazaguanine reductase
13_1_40cm_4_scaffold_3964_10
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

8363..9049
DNA (687bp) protein (229aa)
7-cyano-7-deazaguanine synthase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AA81_GEMAT
preQ(0) biosynthesis protein QueC Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
queC; queuosine biosynthesis protein QueC
13_1_40cm_4_scaffold_3964_11
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

9046..9687
DNA (642bp) protein (214aa)
7-carboxy-7-deazaguanine synthase n=1 Tax=Micromonospora echinospora RepID=Q2MG78_MICEC
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
organic radical activating enzyme
13_1_40cm_4_scaffold_3964_12
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

comp(9688..10881)
DNA (1194bp) protein (398aa)
FAD-dependent pyridine nucleotide-disulfide oxidoreductase id=24466825 bin=RBG_19FT_COMBO_GAL15_69_19 species=Methylobacter tundripaludum genus=Methylobacter taxon_order=Methylococcales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
FAD-dependent pyridine nucleotide-disulfide oxidoreductase Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
13_1_40cm_4_scaffold_3964_13
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10884..12200)
DNA (1317bp) protein (439aa)
Putative lipoprotein n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SI29_NOCSJ
putative lipoprotein
Putative lipoprotein {ECO:0000313|EMBL:ABL81464.1}; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS6
13_1_40cm_4_scaffold_3964_14
Burkholderia mallei, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12205..12534)
DNA (330bp) protein (110aa)
Putative uncharacterized protein n=6 Tax=Burkholderia mallei RepID=A1UXW2_BURMS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABN00144.2}; TaxID=412022 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei group.;" source
13_1_40cm_4_scaffold_3964_15
Burkholderia ambifaria, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12531..13085)
DNA (555bp) protein (185aa)
hypothetical protein n=1 Tax=Pontibacter roseus RepID=UPI00037C348C
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACB65666.1}; Flags: Precursor;; TaxID=398577 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholde
13_1_40cm_4_scaffold_3964_16
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

13207..13833
DNA (627bp) protein (209aa)
Putative transcriptional regulator n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AS97_RUBXD
putative transcriptional regulator
Putative transcriptional regulator {ECO:0000313|EMBL:ABG05731.1}; TaxID=266117 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" sou
13_1_40cm_4_scaffold_3964_17
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(13830..14153)
DNA (324bp) protein (108aa)
MATE efflux family protein
MATE efflux family protein {ECO:0000313|EMBL:AHG91656.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
MatE family protein id=12554642 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
13_1_40cm_4_scaffold_3964_18
unknown

Not on your lists

comp(14132..14788)
DNA (657bp) protein (219aa)

This feature has no annotations

Displaying 18 items

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