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13_1_40cm_4_scaffold_435

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_435_1
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(1..435)
DNA (435bp) protein (145aa)
PBS lyase HEAT domain protein repeat-containing protein
PBS lyase HEAT domain protein repeat-containing protein {ECO:0000313|EMBL:AHG87842.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_4_scaffold_435_2
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(432..2069)
DNA (1638bp) protein (546aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABI2_GEMAT
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
13_1_40cm_4_scaffold_435_3
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(2069..2713)
DNA (645bp) protein (215aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABI3_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_1_40cm_4_scaffold_435_4
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(2710..3252)
DNA (543bp) protein (181aa)
RNA polymerase ECF-type sigma factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABI4_GEMAT
RNA polymerase sigma factor, sigma-70 family
RNA polymerase ECF-type sigma factor Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_1_40cm_4_scaffold_435_5
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(3330..3989)
DNA (660bp) protein (220aa)
upp; uracil phosphoribosyltransferase (EC:2.4.2.9); K00761 uracil phosphoribosyltransferase [EC:2.4.2.9] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Uracil phosphoribosyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AEP3_GEMAT
Uracil phosphoribosyl transferase
13_1_40cm_4_scaffold_435_6
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

4078..4815
DNA (738bp) protein (246aa)
Conserved hypothetical signal peptide protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q024E1_SOLUE
signal peptide protein Tax=RBG_16_Acidobacteria_70_10_curated
signal peptide protein
13_1_40cm_4_scaffold_435_7
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4812..7934
DNA (3123bp) protein (1041aa)
Glycosyl hydrolase, BNR repeat n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q024E0_SOLUE
Uncharacterized protein {ECO:0000313|EMBL:AHX13451.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.
hypothetical protein
13_1_40cm_4_scaffold_435_8
Kribbella flavida, Kribbella, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7931..8680)
DNA (750bp) protein (250aa)
Uncharacterized protein n=1 Tax=Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399) RepID=D2Q3P1_KRIFD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB35913.1}; Flags: Precursor;; TaxID=479435 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Kribbella.;" source="Kribbella flavida (
13_1_40cm_4_scaffold_435_9
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(8802..10280)
DNA (1479bp) protein (493aa)
putative neuraminidase
Putative neuraminidase {ECO:0000313|EMBL:AHG93068.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
BNR/Asp-box repeat protein id=4786441 bin=GWC2_Chloroflexi_73_18 species=Paenibacillus vortex genus=Paenibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
13_1_40cm_4_scaffold_435_10
RBG_13_Bacteroidetes_42_15_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10323..11486
DNA (1164bp) protein (388aa)
Uncharacterized protein n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4L6K8_HALH1
hypothetical protein Tax=RBG_13_Bacteroidetes_42_15_curated
hypothetical protein
13_1_40cm_4_scaffold_435_11
RLO_Entotheonella_69_37, Entotheonella, Bacteria

Not on your lists

comp(11433..12227)
DNA (795bp) protein (265aa)
Putative uncharacterized protein n=1 Tax=Symbiobacterium thermophilum (strain T / IAM 14863) RepID=Q67LL2_SYMTH
hypothetical protein
hypothetical protein; K03478 hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Entotheonella_69_37_curated
13_1_40cm_4_scaffold_435_12
R_Deltaproteobacteria_44_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12262..13011)
DNA (750bp) protein (250aa)
putative glycosyltransferase (EC:2.4.-.-) Tax=RIFCSPHIGHO2_02_FULL_Deltaproteobacteria_44_16_curated
Dolichol-P-glucose synthetase n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9KZR5_THERP
dolichol-P-glucose synthetase
13_1_40cm_4_scaffold_435_13
Acidovorax citrulli, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13258..14532
DNA (1275bp) protein (425aa)
Fimbrial assembly family protein n=1 Tax=Acidovorax citrulli (strain AAC00-1) RepID=A1TUQ6_ACIAC
fimbrial assembly family protein
Fimbrial assembly family protein {ECO:0000313|EMBL:ABM34694.1}; Flags: Precursor;; TaxID=397945 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" so
13_1_40cm_4_scaffold_435_14
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

14489..15160
DNA (672bp) protein (224aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7C7_GEMAT
General secretion pathway M protein
General secretion pathway M protein {ECO:0000313|EMBL:AHG91943.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_4_scaffold_435_15
unknown

Not on your lists

15157..15648
DNA (492bp) protein (164aa)

This feature has no annotations

13_1_40cm_4_scaffold_435_16
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

15645..17435
DNA (1791bp) protein (597aa)
Putative general secretion pathway protein D n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7C5_GEMAT
type II and III secretion system protein
Type II and III secretion system protein {ECO:0000313|EMBL:AHG91941.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_4_scaffold_435_17
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

17432..19048
DNA (1617bp) protein (539aa)
type II secretion system protein E
Type II secretion system protein E {ECO:0000313|EMBL:AHG91940.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
General secretion pathway protein E (Type II traffic warden ATPase) id=14627801 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
13_1_40cm_4_scaffold_435_18
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

19045..20244
DNA (1200bp) protein (400aa)
General secretion pathway protein F n=1 Tax=delta proteobacterium NaphS2 RepID=D8EYF9_9DELT
Type II secretion system F domain-containing protein
Type II secretion system F domain-containing protein {ECO:0000313|EMBL:AHG91939.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_4_scaffold_435_19
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(20241..21065)
DNA (825bp) protein (275aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG91945.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_4_scaffold_435_20
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(21062..21436)
DNA (375bp) protein (125aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG91947.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_4_scaffold_435_21
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(21433..22014)
DNA (582bp) protein (194aa)
Uncharacterized protein {ECO:0000313|EMBL:AHG91946.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_4_scaffold_435_22
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22032..23240)
DNA (1209bp) protein (403aa)
Integrins alpha chain n=2 Tax=Nitrosococcus oceani RepID=Q3JD55_NITOC
Uncharacterized protein {ECO:0000313|EMBL:ETW97403.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
Integrins alpha chain
13_1_40cm_4_scaffold_435_23
unknown

Not on your lists

comp(23405..23572)
DNA (168bp) protein (56aa)

This feature has no annotations

13_1_40cm_4_scaffold_435_24
unknown

Not on your lists

comp(23602..24672)
DNA (1071bp) protein (357aa)

This feature has no annotations

13_1_40cm_4_scaffold_435_25
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(25017..25706)
DNA (690bp) protein (230aa)
Two component, sigma54 specific, transcriptional regulator, Fis family id=3102610 bin=GWC2_Methylomirabilis_70_16 species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Fis family transcriptional regulator; K07712 two-component system, NtrC family, nitrogen regulation response regulator GlnG Tax=GWC2_Rokubacteria_70_16_curated
AAA domain family protein
Displaying 25 items

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