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13_1_40cm_4_scaffold_5220

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_5220_1
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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2..1024
DNA (1023bp) protein (341aa)
lysA; diaminopimelate decarboxylase (EC:4.1.1.20); K01586 diaminopimelate decarboxylase [EC:4.1.1.20] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
lysA; diaminopimelate decarboxylase (EC:4.1.1.20); K01586 diaminopimelate decarboxylase [EC:4.1.1.20] id=14627103 bin=bin7_NC10_sister species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=bin7_NC10_sister organism_group=NC10
diaminopimelate decarboxylase
13_1_40cm_4_scaffold_5220_2
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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1009..2577
DNA (1569bp) protein (523aa)
guaA; GMP synthase (EC:6.3.5.2); K01951 GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
GMP synthase [glutamine-hydrolyzing] n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=GUAA_GEMAT
GMP synthase [glutamine-hydrolyzing]
13_1_40cm_4_scaffold_5220_3
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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2684..3052
DNA (369bp) protein (123aa)
Putative pilin n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3H6_GEMAT
putative pilin Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
putative pilin
13_1_40cm_4_scaffold_5220_4
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(3049..3501)
DNA (453bp) protein (151aa)
Phosphotransferase system enzyme IIA component n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3V8_GEMAT
fruA; phosphotransferase system enzyme IIA component
Phosphotransferase system enzyme IIA component {ECO:0000313|EMBL:BAH38783.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimona
13_1_40cm_4_scaffold_5220_5
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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3562..4551
DNA (990bp) protein (330aa)
tRNA-dihydrouridine synthase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3V7_GEMAT
putative tRNA-dihydrouridine synthase Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
TIM-barrel protein, nifR3 family
13_1_40cm_4_scaffold_5220_6
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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4548..5222
DNA (675bp) protein (225aa)
1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase n=1 Tax=Desulfitobacterium metallireducens DSM 15288 RepID=G6GKT7_9FIRM
1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase; K06898 Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate carboxylase
13_1_40cm_4_scaffold_5220_7
unknown

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comp(5209..5859)
DNA (651bp) protein (217aa)

This feature has no annotations

13_1_40cm_4_scaffold_5220_8
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(7113..8111)
DNA (999bp) protein (333aa)
Phosphate-induced protein 1 conserved region (Fragment) n=2 Tax=mine drainage metagenome RepID=T1BRL0_9ZZZZ
phosphate-responsive 1 family protein
Phosphate-responsive 1 family protein {ECO:0000313|EMBL:AHG93749.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_4_scaffold_5220_9
unknown

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8317..8727
DNA (411bp) protein (137aa)

This feature has no annotations

13_1_40cm_4_scaffold_5220_10
unknown

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comp(8724..9614)
DNA (891bp) protein (297aa)

This feature has no annotations

13_1_40cm_4_scaffold_5220_11
Desmospora sp. 8437, Desmospora, Bacillales, Bacilli, Firmicutes, Bacteria

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9738..10451
DNA (714bp) protein (238aa)
Uncharacterized protein n=1 Tax=Desmospora sp. 8437 RepID=F5SEM1_9BACL
Uncharacterized protein {ECO:0000313|EMBL:EGK12485.1}; TaxID=997346 species="Bacteria; Firmicutes; Bacilli; Bacillales; Thermoactinomycetaceae; Desmospora.;" source="Desmospora sp. 8437.;"
yknW; hypothetical protein
13_1_40cm_4_scaffold_5220_12
RIFOXYB2_FULL_WOR_1_48_7_curated, WOR-1, Bacteria

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comp(10452..10739)
DNA (288bp) protein (96aa)
ppdK; pyruvate phosphate dikinase; K01006 pyruvate,orthophosphate dikinase [EC:2.7.9.1] Tax=RIFOXYB2_FULL_WOR_1_48_7_curated
pyruvate phosphate dikinase (EC:2.7.9.1)
Pyruvate, phosphate dikinase n=1 Tax=Prevotella oulorum F0390 RepID=G1W9E3_9BACT
13_1_40cm_4_scaffold_5220_13
Mastigocladus laminosus, Mastigocladus, Stigonematales, Cyanobacteria, Bacteria

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11920..12981
DNA (1062bp) protein (354aa)
Uncharacterized protein {ECO:0000313|EMBL:KIY13550.1}; TaxID=1594576 species="Bacteria; Cyanobacteria; Stigonematales; Mastigocladus.;" source="Mastigocladus laminosus UU774.;"
hypothetical protein id=1247125 bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
hypothetical protein
13_1_40cm_4_scaffold_5220_14
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(13103..14278)
DNA (1176bp) protein (392aa)
purF; amidophosphoribosyltransferase (EC:2.4.2.14); K00764 amidophosphoribosyltransferase [EC:2.4.2.14] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Amidophosphoribosyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3V5_GEMAT
amidophosphoribosyltransferase
Displaying 14 items

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