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13_1_40cm_4_scaffold_5602

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_5602_1
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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2..1486
DNA (1485bp) protein (495aa)
universal stress protein UspA n=1 Tax=Poribacteria bacterium WGA-3G RepID=UPI0003B4FCA4
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_1_40cm_4_scaffold_5602_2
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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1483..2241
DNA (759bp) protein (253aa)
radical SAM protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Radical SAM superfamily protein, putative Coenzyme PQQ synthesis protein E id=4374012 bin=GWC2_Deltaproteobacteria_42_51 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
radical SAM protein
13_1_40cm_4_scaffold_5602_3
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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2738..4408
DNA (1671bp) protein (557aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein id=14429058 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Poribacteria tax=bin3_NC10 organism_group=NC10
hypothetical protein
13_1_40cm_4_scaffold_5602_4
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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4395..5201
DNA (807bp) protein (269aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
cyhA; 18 kda cytochrome c553 id=14627776 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Poribacteria tax=bin7_NC10_sister organism_group=NC10
heme-binding protein
13_1_40cm_4_scaffold_5602_5
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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5198..5965
DNA (768bp) protein (256aa)
Putative (Diheme) protein id=4083690 bin=GWA2_Methylomirabilis_73_35 species=endosymbiont of Tevnia jerichonana genus=unknown taxon_order=unknown taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
hypothetical protein
13_1_40cm_4_scaffold_5602_6
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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5932..7497
DNA (1566bp) protein (522aa)
putative cytochrome c Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
putative cytochrome c id=14627501 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=bin7_NC10_sister organism_group=NC10
putative cytochrome c
13_1_40cm_4_scaffold_5602_7
R_Acidobacteria_67_21, Acidobacteria, Bacteria

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7494..8276
DNA (783bp) protein (261aa)
hypothetical protein n=1 Tax=Candidatus Omnitrophus fodinae SCGC AAA011-A17 RepID=UPI0003B5F0A6
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
hypothetical protein
13_1_40cm_4_scaffold_5602_8
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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8296..8964
DNA (669bp) protein (223aa)
heme/copper-type cytochrome/quinol oxidases subunit 2 Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Putative cytochrome c oxidase, subunit II id=1881842 bin=GWD2_Deltaproteobacteria_55_8 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
heme/copper-type cytochrome/quinol oxidases subunit 2
13_1_40cm_4_scaffold_5602_9
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

10145..10675
DNA (531bp) protein (177aa)
cytochrome c oxidase subunit I (EC:1.9.3.1); K02274 cytochrome c oxidase subunit I [EC:1.9.3.1] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Cytochrome c oxidase subunit I id=1881839 bin=GWD2_Deltaproteobacteria_55_8 species=Isosphaera pallida genus=Isosphaera taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
cytochrome C oxidase
13_1_40cm_4_scaffold_5602_10
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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10692..11387
DNA (696bp) protein (232aa)
ctaE; putative transmembrane cytochrome oxidase subunit; K02276 cytochrome c oxidase subunit III [EC:1.9.3.1] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Cytochrome c oxidase subunit III id=1881833 bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
heme/copper-type cytochrome/quinol oxidase, subunit 3
13_1_40cm_4_scaffold_5602_11
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

11400..11693
DNA (294bp) protein (98aa)
Caa(3)-type oxidase, subunit IV n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2IP49_ANADE
caa(3)-type oxidase, subunit IV Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Caa(3)-type oxidase, subunit IV
13_1_40cm_4_scaffold_5602_12
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

12063..12503
DNA (441bp) protein (147aa)
protoheme IX farnesyltransferase; K02301 protoheme IX farnesyltransferase [EC:2.5.1.-] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
ctaB; protoheme IX farnesyltransferase (Heme O synthase) (Heme B farnesyltransferase) (EC:2.5.1.-) id=14627496 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
protoheme IX farnesyltransferase
13_1_40cm_4_scaffold_5602_13
unknown

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12518..12685
DNA (168bp) protein (56aa)

This feature has no annotations

13_1_40cm_4_scaffold_5602_14
unknown

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12682..12810
DNA (129bp) protein (43aa)

This feature has no annotations

Displaying 14 items

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