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13_1_40cm_4_scaffold_7275

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_7275_1
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

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1..174
DNA (174bp) protein (58aa)
Uncharacterized protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
13_1_40cm_4_scaffold_7275_2
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

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171..1130
DNA (960bp) protein (320aa)
Esterase/lipase n=1 Tax=uncultured bacterium RepID=D8V1I8_9BACT
poly(3-hydroxybutyrate) depolymerase; K03932 polyhydroxybutyrate depolymerase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
hypothetical protein
13_1_40cm_4_scaffold_7275_3
unknown

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1315..1617
DNA (303bp) protein (101aa)

This feature has no annotations

13_1_40cm_4_scaffold_7275_4
R_Ignavibacteria_55_14, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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1669..2229
DNA (561bp) protein (187aa)
Bifunctional deaminase-reductase domain protein id=4979044 bin=GWA2_Ignavibacteria_55_11 species=Candidatus Solibacter usitatus genus=Candidatus Solibacter taxon_order=Solibacterales taxon_class=Solibacteres phylum=Acidobacteria tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
deaminase-reductase domain-containing protein Tax=RIFCSPLOWO2_02_FULL_Ignavibacteria_55_14_curated
deaminase-reductase domain-containing protein
13_1_40cm_4_scaffold_7275_5
unknown

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2547..3017
DNA (471bp) protein (157aa)

This feature has no annotations

13_1_40cm_4_scaffold_7275_6
unknown

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3145..3498
DNA (354bp) protein (118aa)

This feature has no annotations

13_1_40cm_4_scaffold_7275_7
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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3597..3860
DNA (264bp) protein (88aa)
competence-specific genes regulator Tax=RBG_16_Gemmatimonadetes_66_8_curated
Regulator of competence-specific genes id=3788263 bin=GWC2_Nitrospirae_57_13 species=Desulfosporosinus meridiei genus=Desulfosporosinus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
competence-specific genes regulator
13_1_40cm_4_scaffold_7275_8
Brevundimonas sp. EAKA, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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3857..4285
DNA (429bp) protein (143aa)
hypothetical protein n=1 Tax=alpha proteobacterium L41A RepID=UPI00038149DD
Uncharacterized protein {ECO:0000313|EMBL:KDP94808.1}; TaxID=1495854 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas s
hypothetical protein
13_1_40cm_4_scaffold_7275_9
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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4502..5848
DNA (1347bp) protein (449aa)
Periplasmic component of the Tol biopolymer transport system-like protein n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MDG2_RHOM4
WD40-like beta Propeller containing protein
WD40-like beta Propeller containing protein {ECO:0000313|EMBL:AHG88938.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_4_scaffold_7275_10
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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5848..5976
DNA (129bp) protein (43aa)
WD40-like beta Propeller containing protein
WD40-like beta Propeller containing protein {ECO:0000313|EMBL:AHG88938.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
WD40 domain-containing protein id=12556809 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=Opitutae phylum=Verrucomicrobia tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
13_1_40cm_4_scaffold_7275_11
Kineosphaera limosa, Kineosphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6024..6782
DNA (759bp) protein (253aa)
Uncharacterized protein n=1 Tax=Kineosphaera limosa NBRC 100340 RepID=K6WNZ1_9MICO
Uncharacterized protein {ECO:0000313|EMBL:GAB95541.1}; TaxID=1184609 species="Bacteria; Actinobacteria; Micrococcales; Dermatophilaceae; Kineosphaera.;" source="Kineosphaera limosa NBRC 100340.;"
hypothetical protein
13_1_40cm_4_scaffold_7275_12
GWC2_WWE3_41_23, WWE3, Bacteria

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comp(6959..7327)
DNA (369bp) protein (123aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KKS03136.1}; TaxID=1619123 species="Bacteria; candidate division WWE3.;" source="candidate division WWE3 bacterium GW2011_GWC2_41_23.;"
transmembrane_regions 4..21 id=725386 bin=RAAC2_WWE3 species=RAAC2_WWE3 genus=RAAC2_WWE3 taxon_order=RAAC2_WWE3 taxon_class=RAAC2_WWE3 phylum=WWE3 tax=RAAC2_WWE3 organism_group=WWE3
13_1_40cm_4_scaffold_7275_13
RBG_16_Gammaproteobacteria_51_14_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7842..8603
DNA (762bp) protein (254aa)
Two component transcriptional regulator, LuxR family n=1 Tax=Desulfovibrio africanus str. Walvis Bay RepID=F3Z1R8_DESAF
response regulator Tax=RBG_16_Gammaproteobacteria_51_14_curated
two component transcriptional regulator, LuxR family
13_1_40cm_4_scaffold_7275_14
Alcanivorax sp. 19-m-6, Alcanivorax, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8795..9832
DNA (1038bp) protein (346aa)
Uncharacterized protein {ECO:0000313|EMBL:KGD62148.1}; TaxID=1177154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Alcanivoracaceae; Alcanivorax.;" source="Alcanivorax sp.
Uncharacterized protein id=1821595 bin=GWD2_Nitrospirae-related_57_8 species=Glaciecola psychrophila genus=Glaciecola taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits
13_1_40cm_4_scaffold_7275_15
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(9891..10664)
DNA (774bp) protein (258aa)
mazG; putative nucleoside triphosphate pyrophosphohydrolase; K02428 dITP/XTP pyrophosphatase [EC:3.6.1.19] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
MazG family protein n=1 Tax=Dictyoglomus turgidum (strain Z-1310 / DSM 6724) RepID=B8E2E3_DICTD
MazG family protein
13_1_40cm_4_scaffold_7275_16
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

10712..11719
DNA (1008bp) protein (336aa)
alanine racemase (EC:5.1.1.1); K01775 alanine racemase [EC:5.1.1.1] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
alanine racemase n=1 Tax=Scytonema hofmanni RepID=UPI00034A0910
Alanine racemase
Displaying 16 items

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