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13_1_40cm_4_scaffold_7398

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_7398_1
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3..944
DNA (942bp) protein (314aa)
dihydrodipicolinate reductase (EC:1.3.1.26)
4-hydroxy-tetrahydrodipicolinate reductase {ECO:0000256|SAAS:SAAS00018107}; EC=1.17.1.8 {ECO:0000256|SAAS:SAAS00018107};; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteo
Dihydrodipicolinate reductase n=1 Tax=Rhodanobacter denitrificans RepID=I4WW70_9GAMM
13_1_40cm_4_scaffold_7398_2
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1014..1829
DNA (816bp) protein (272aa)
LysR family transcriptional regulator YnfL n=1 Tax=Stenotrophomonas maltophilia D457 RepID=I0KIA9_STEMA
LysR family transcriptional regulator YnfL
LysR family transcriptional regulator YnfL {ECO:0000313|EMBL:CCH10798.1}; TaxID=1163399 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Ste
13_1_40cm_4_scaffold_7398_3
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

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comp(1959..3041)
DNA (1083bp) protein (361aa)
hypothetical protein id=12557309 bin=CNBR_ACIDO species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
XRE family transcriptional regulator
13_1_40cm_4_scaffold_7398_4
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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3889..5775
DNA (1887bp) protein (629aa)
Sensor protein n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=E3FXP4_STIAD
Predicted periplasmic ligand-binding sensor domain {ECO:0000313|EMBL:CDM65942.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methyla
sensor protein
13_1_40cm_4_scaffold_7398_5
R_Ignavibacteria_55_14, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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5800..6894
DNA (1095bp) protein (365aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI000376B06A
two component regulator, sensor protein Tax=RIFCSPLOWO2_02_FULL_Ignavibacteria_55_14_curated
two component regulator propeller/histidine kinase domain-containing protein
13_1_40cm_4_scaffold_7398_6

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6891..7541
DNA (651bp) protein (217aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI000379C3CB
Response regulator {ECO:0000313|EMBL:AGW45550.1}; TaxID=1403002 species="Bacteria; environmental samples.;" source="uncultured bacterium Lac161.;"
two-component response regulator
13_1_40cm_4_scaffold_7398_7

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7717..8091
DNA (375bp) protein (125aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI000379C782
Transcriptional regulator {ECO:0000313|EMBL:AGW45549.1}; TaxID=1403002 species="Bacteria; environmental samples.;" source="uncultured bacterium Lac161.;"
DNA-binding response regulator, LuxR family
13_1_40cm_4_scaffold_7398_8
Planctopirus limnophila, Planctopirus, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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8112..8690
DNA (579bp) protein (193aa)
Cupin 2 conserved barrel domain protein n=1 Tax=Planctomyces limnophilus (strain ATCC 43296 / DSM 3776 / IFAM 1008 / 290) RepID=D5SZ18_PLAL2
cupin
Cupin 2 conserved barrel domain protein {ECO:0000313|EMBL:ADG69919.1}; TaxID=521674 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Planctopirus.;" source="Plan
13_1_40cm_4_scaffold_7398_9
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

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8964..9131
DNA (168bp) protein (56aa)
methionine synthase (B12-independent) (EC:2.1.1.14); K00549 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
methionine synthase (B12-independent) (EC:2.1.1.14); K00549 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
hypothetical protein n=1 Tax=unclassified candidate division EM 19 RepID=UPI000361F139
Displaying 9 items

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