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13_1_40cm_4_scaffold_8086

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_8086_1
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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170..814
DNA (645bp) protein (215aa)
RNA polymerase sigma factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AEN0_GEMAT
RNA polymerase ECF-type sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RBG_16_Gemmatimonadetes_66_8_curated
RNA polymerase sigma factor, sigma-70 family
13_1_40cm_4_scaffold_8086_2
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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1453..2529
DNA (1077bp) protein (359aa)
holA; putative DNA polymerase III delta subunit (EC:2.7.7.7); K02340 DNA polymerase III subunit delta [EC:2.7.7.7] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
holA; putative DNA polymerase III delta subunit (EC:2.7.7.7)
Putative DNA polymerase III delta subunit n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AEM8_GEMAT
13_1_40cm_4_scaffold_8086_3
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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2526..3413
DNA (888bp) protein (296aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AEM7_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_1_40cm_4_scaffold_8086_4
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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3410..6007
DNA (2598bp) protein (866aa)
DNA mismatch repair protein MutS n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AEM6_GEMAT
mutS; DNA mismatch repair protein MutS; K03555 DNA mismatch repair protein MutS Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
DNA mismatch repair protein mutS
13_1_40cm_4_scaffold_8086_5
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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6009..6605
DNA (597bp) protein (199aa)
PREDICTED: uncharacterized protein LOC100208015 n=1 Tax=unknown RepID=UPI0002B4A5BA
TonB-like Tax=RBG_16_Gemmatimonadetes_66_8_curated
TonB family protein
13_1_40cm_4_scaffold_8086_6
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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6589..7974
DNA (1386bp) protein (462aa)
cbs; cystathionine beta-synthase (EC:4.2.1.22); K01697 cystathionine beta-synthase [EC:4.2.1.22] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Cystathionine beta-synthase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AEM2_GEMAT
Pyridoxal-5'-phosphate-dependent protein beta subunit
13_1_40cm_4_scaffold_8086_7

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7975..8994
DNA (1020bp) protein (340aa)
D-alanine--D-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732}; EC=6.3.2.4 {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732};; D-Ala-D-Ala ligase {ECO:0000
ddl; D-alanine--D-alanine ligase (EC:6.3.2.4)
D-alanine--D-alanine ligase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AEL0_GEMAT
13_1_40cm_4_scaffold_8086_8
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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9014..9883
DNA (870bp) protein (290aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AEK9_GEMAT
rhomboid family protein Tax=GWC2_Gemmatimonadetes_71_10_curated
Peptidase S54, rhomboid domain protein
13_1_40cm_4_scaffold_8086_9
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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9888..11759
DNA (1872bp) protein (624aa)
hypothetical protein Tax=GWC2_Gemmatimonadetes_71_10_curated
Displaying 9 items

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