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13_1_40cm_4_scaffold_1266_20

Organism: 13_1_40CM_4_Gemmatimonadetes_65_7

partial RP 19 / 55 MC: 6 BSCG 17 / 51 MC: 4 ASCG 7 / 38 MC: 2
Location: comp(19317..20867)

Top 3 Functional Annotations

Value Algorithm Source
Putative NtrC family two-component response regulator n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABD4_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 59.4
  • Coverage: 421.0
  • Bit_score: 449
  • Evalue 5.30e-123
putative NtrC family two-component response regulator Tax=RBG_16_Gemmatimonadetes_66_8_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 62.3
  • Coverage: 528.0
  • Bit_score: 623
  • Evalue 3.80e-175
sigma-54 factor interaction domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 58.4
  • Coverage: 524.0
  • Bit_score: 545
  • Evalue 1.50e-152

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Taxonomy

RBG_16_Gemmatimonadetes_66_8_curated → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 1551
ATGCCTGACCGCGTTCTCATAACCACCGACGACCTCGAGCAGGCGGTCCGCATCAACGCGGCACTCGAGCAGGGGCGGTTCGACACCGCGATGGTCTCCTCGCTCGACGACGTCCGGCAAGCCGTCCGGGGCCGCCAGCCGCCGCCCGACGCCATCATCCTGACGGGCGGGCTGCACGAGTCCACGGCGCAACGGCTGCTCGCTGCGGCACACGAACACGCGGTATCGACGTTGGGCCTCGTCGAGGCGACCGATGACGATCCCGCGCGCATCGGCACCGAGCTAGGTCTCACGGCCTGGCTCGTCAAGCCGACCGATCCGCTCGAGGTCACGGCGACCGTCCGGCGACTCATCGAGCGCCGGCGCTTGCAACAGCGCACCGGCATCCTGGGCGAGTCAGCGGCGATCCAGGAAGTGCTGGTGAAGATCGAGCAGATGGCGCCGGTGACCTCGACCGTGTTGATCGAGGGCGAATCGGGCACAGGCAAGGAGCTCGTCGCGCGCGGGATCCACGATCTCTCGCCGCGGCGCGGCAAGGCGTTCATCGCCGTCAACTGCGCCGCATTGCCCGAGACCTTGCTCGAGAGCGAGCTGTTCGGTCACGAGAAGGGCGCATTCACCGGTGCGGCCGAGCGGCGGTTGGGACGATTCGAGCTGGCGAACGGCGGCACGATCCTGCTCGACGAAATCGGCGAGATGCCGGCGTCGACGCAGGTGAAGCTGCTGCGCGTGCTCGAGGATAGGAGTTTCTTCCGCGTCGGCGGAACGCAGCCGATTCAGGTGGACGTGCGCGTCACCGCCGCCACGAACAAGTCGGTGAAGGAAGCCGTCGCCCTCGGCCGGTTCCGCGACGACCTCTACTACCGCCTCAATGTGCTGTCCGTCTATCTCCCGCCCCTGCGCGAGCGGCGCAGCGACATTCCCTTGCTCGTGCGCACGTTCGTCGCCGAATTCGCCAAGACGCACGCACGCACGTTCCGCGGCATCACGCCCGAGGCGATGCAGATCCTCGTCGCGGCGGATTGGCCCGGCAACGTGCGCCAGCTCAAGAACCTCATCGAGTCGATGGTGGTGCTCGCGCCCGAAGGCGAGATCCGCGCGAGCGACATCCCGCGCGACATCCGCGAGCGCACGCGCACGATGCCGGTGCGCATTGCGGAAGTGCAGGGAGTCCCGCGCGAAATCACGGGACAAGAGCTCGAGTTCATTTTCCGGACGCTCGTCGAGATGAAGGTGCAGCTCGAGGAGCTGCGGCATCGCATCGAGGAGCGCGCTCCGGAGCGCGTGGAGGTGATCGAAGTAGGAGGGAGCAGGGAGCAGGGAGCAGGGAGCAGAAGGCTGGAGCCCGCGACGGTCGATCCGCTCGACTCGACTCCCGAACCGGACGGTCCCGTCGTCTACAAAGCCGGCATGACGATGTCCGACGTCGAGCGCGCGGCGATCGACGCGGCGTTGCGCGAGACCCGCGGCAATCGCCGCAAGGCGGCGGAGGTGTTGGGAATCGGCGAGCGGACCCTCTATCGCAAACTCAAGGAATACGCGATATCTTAG
PROTEIN sequence
Length: 517
MPDRVLITTDDLEQAVRINAALEQGRFDTAMVSSLDDVRQAVRGRQPPPDAIILTGGLHESTAQRLLAAAHEHAVSTLGLVEATDDDPARIGTELGLTAWLVKPTDPLEVTATVRRLIERRRLQQRTGILGESAAIQEVLVKIEQMAPVTSTVLIEGESGTGKELVARGIHDLSPRRGKAFIAVNCAALPETLLESELFGHEKGAFTGAAERRLGRFELANGGTILLDEIGEMPASTQVKLLRVLEDRSFFRVGGTQPIQVDVRVTAATNKSVKEAVALGRFRDDLYYRLNVLSVYLPPLRERRSDIPLLVRTFVAEFAKTHARTFRGITPEAMQILVAADWPGNVRQLKNLIESMVVLAPEGEIRASDIPRDIRERTRTMPVRIAEVQGVPREITGQELEFIFRTLVEMKVQLEELRHRIEERAPERVEVIEVGGSREQGAGSRRLEPATVDPLDSTPEPDGPVVYKAGMTMSDVERAAIDAALRETRGNRRKAAEVLGIGERTLYRKLKEYAIS*