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13_1_40cm_4_scaffold_1266

Search features with annotation key words

Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_1266_1
CG_Deferri_01, Deferribacterales, Deferribacteres, Deferribacteres, Bacteria

Not on your lists

comp(3..1940)
DNA (1938bp) protein (646aa)
hypothetical protein n=1 Tax=SAR406 cluster bacterium SCGC AB-629-J13 RepID=UPI0003822517
hypothetical protein Tax=CG_Deferri_01
hypothetical protein
13_1_40cm_4_scaffold_1266_2
unknown

Not on your lists

2046..3269
DNA (1224bp) protein (408aa)

This feature has no annotations

13_1_40cm_4_scaffold_1266_3
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(3825..4823)
DNA (999bp) protein (333aa)
Streptogramin lyase n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MKG0_RHOM4
streptogramin lyase Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
streptogramin lyase
13_1_40cm_4_scaffold_1266_4
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(4826..5350)
DNA (525bp) protein (175aa)
atpH; ATP synthase subunit delta (EC:3.6.3.14); K02113 F-type H+-transporting ATPase subunit delta [EC:3.6.3.14] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
ATP synthase subunit delta n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=ATPD_GEMAT
ATP synthase subunit delta
13_1_40cm_4_scaffold_1266_5
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(5347..5901)
DNA (555bp) protein (185aa)
atpF; ATP synthase subunit b (EC:3.6.3.14); K02109 F-type H+-transporting ATPase subunit b [EC:3.6.3.14] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
ATP synthase subunit b n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABC4_GEMAT
ATP synthase subunit b
13_1_40cm_4_scaffold_1266_6
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(5903..6175)
DNA (273bp) protein (91aa)
ATP synthase F0 subcomplex C subunit (EC:3.6.3.14) Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
ATP synthase subunit c id=4010161 bin=GWF2_Bacteroidetes_42_66 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Bacteroidetes_42_66 organism_group=Bacteroidetes organism_desc=a73
hypothetical protein
13_1_40cm_4_scaffold_1266_7
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(6196..7047)
DNA (852bp) protein (284aa)
ATP synthase subunit a n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABC6_GEMAT
ATP synthase subunit a
ATP synthase subunit a {ECO:0000256|HAMAP-Rule:MF_01393, ECO:0000256|RuleBase:RU000483}; ATP synthase F0 sector subunit a {ECO:0000256|HAMAP-Rule:MF_01393}; F-ATPase subunit 6 {ECO:0000256|HAMAP-Rule:
13_1_40cm_4_scaffold_1266_8
RBG_16_Acidobacteria_68_9_curated, Acidobacteria, Bacteria

Not on your lists

comp(7044..7373)
DNA (330bp) protein (110aa)
Tax=RBG_16_Acidobacteria_68_9_curated
13_1_40cm_4_scaffold_1266_9
RBG_16_Acidobacteria_68_9_curated, Acidobacteria, Bacteria

Not on your lists

comp(7408..7653)
DNA (246bp) protein (82aa)
Tax=RBG_16_Acidobacteria_68_9_curated
13_1_40cm_4_scaffold_1266_10
RBG_16_Acidobacteria_68_9_curated, Acidobacteria, Bacteria

Not on your lists

7739..8776
DNA (1038bp) protein (346aa)
hypothetical protein; K03924 MoxR-like ATPase [EC:3.6.3.-] Tax=RBG_16_Acidobacteria_68_9_curated
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABD0_GEMAT
ATPase associated with various cellular activities AAA_3
13_1_40cm_4_scaffold_1266_11
unknown

Not on your lists

comp(8855..9259)
DNA (405bp) protein (135aa)

This feature has no annotations

13_1_40cm_4_scaffold_1266_12
RLO_PLX_64_10, Bacteria

Not on your lists

comp(9219..10208)
DNA (990bp) protein (330aa)
Alpha/beta hydrolase fold protein n=1 Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2B5U1_STRRD
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
alpha/beta hydrolase fold protein
13_1_40cm_4_scaffold_1266_13
unknown

Not on your lists

comp(10205..10546)
DNA (342bp) protein (114aa)

This feature has no annotations

13_1_40cm_4_scaffold_1266_14
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

10601..11029
DNA (429bp) protein (143aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG91205.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_4_scaffold_1266_15
RBG_16_Acidobacteria_68_9_curated, Acidobacteria, Bacteria

Not on your lists

11153..14479
DNA (3327bp) protein (1109aa)
Transcriptional regulator, putative ATPase, winged helix family n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CQA9_PSEUX
transcriptional activator domain-containing protein Tax=RBG_16_Acidobacteria_68_9_curated
winged helix family transcriptional regulator
13_1_40cm_4_scaffold_1266_16
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(14488..15861)
DNA (1374bp) protein (458aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABD2_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
hypothetical protein
13_1_40cm_4_scaffold_1266_17
uncultured myxobacterium HF0200_05J13, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16149..16748)
DNA (600bp) protein (200aa)
FOG: CheY-like receiver n=1 Tax=uncultured myxobacterium HF0200_05J13 RepID=E7C3L8_9DELT
FOG: CheY-like receiver {ECO:0000313|EMBL:ADI22042.1}; TaxID=723557 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; environmental samples.;" source="uncultured myxobacterium HF02
DNA-binding response regulator
13_1_40cm_4_scaffold_1266_18
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(16873..17604)
DNA (732bp) protein (244aa)
Uncharacterized protein n=1 Tax=Thermosediminibacter oceani (strain ATCC BAA-1034 / DSM 16646 / JW/IW-1228P) RepID=D9RYM4_THEOJ
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
hypothetical protein
13_1_40cm_4_scaffold_1266_19
CG_Solirubrobact_01, Rubrobacteridae, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17601..19163)
DNA (1563bp) protein (521aa)
Fe-S cluster domain protein n=1 Tax=Spirochaeta thermophila (strain ATCC 700085 / DSM 6578 / Z-1203) RepID=G0GFC5_SPITZ
putative PAS/PAC sensor protein Tax=CG_Solirubrobact_01
Fe-S cluster domain-containing protein
13_1_40cm_4_scaffold_1266_20
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(19317..20867)
DNA (1551bp) protein (517aa)
Putative NtrC family two-component response regulator n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABD4_GEMAT
putative NtrC family two-component response regulator Tax=RBG_16_Gemmatimonadetes_66_8_curated
sigma-54 factor interaction domain-containing protein
13_1_40cm_4_scaffold_1266_21
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(20860..21369)
DNA (510bp) protein (170aa)
Molybdopterin adenylyltransferase n=1 Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6Q0W9_9FIRM
moaB; molybdopterin adenylyltransferase MoaB Tax=RBG_16_Gemmatimonadetes_66_8_curated
molybdenum cofactor synthesis domain protein
13_1_40cm_4_scaffold_1266_22
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(21404..22510)
DNA (1107bp) protein (369aa)
gcvT; aminomethyltransferase (EC:2.1.2.10); K00605 aminomethyltransferase [EC:2.1.2.10] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
gcvT; aminomethyltransferase (EC:2.1.2.10)
Aminomethyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABD5_GEMAT
13_1_40cm_4_scaffold_1266_23
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(22510..23409)
DNA (900bp) protein (300aa)
argF; ornithine carbamoyltransferase (EC:2.1.3.3) Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Ornithine carbamoyltransferase, catabolic n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABD7_GEMAT
Ornithine carbamoyltransferase
13_1_40cm_4_scaffold_1266_24
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(23491..25032)
DNA (1542bp) protein (514aa)
ATP-dependent protease ATPase subunit HslU n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SG16_RHOMR
ATP-dependent hsl protease ATP-binding subunit hslU; K03667 ATP-dependent HslUV protease ATP-binding subunit HslU Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
ATP-dependent hsl protease ATP-binding subunit hslU
13_1_40cm_4_scaffold_1266_25
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(25035..25571)
DNA (537bp) protein (179aa)
ATP-dependent protease subunit HslV {ECO:0000256|HAMAP-Rule:MF_00248, ECO:0000256|SAAS:SAAS00019556}; EC=3.4.25.2 {ECO:0000256|HAMAP-Rule:MF_00248, ECO:0000256|SAAS:SAAS00019493};; TaxID=861299 specie
ATP-dependent protease subunit HslV n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=HSLV_GEMAT
ATP-dependent protease hslV
13_1_40cm_4_scaffold_1266_26
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(25580..26485)
DNA (906bp) protein (302aa)
Tyrosine recombinase XerC n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABE3_GEMAT
xerC; tyrosine recombinase XerC; K03733 integrase/recombinase XerC Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Tyrosine recombinase xerC
13_1_40cm_4_scaffold_1266_27
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(26482..27786)
DNA (1305bp) protein (435aa)
gid; tRNA uridine 5-carboxymethylaminomethyl modification enzyme Gid; K04094 methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_
Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABE4_GEMAT
gid; tRNA uridine 5-carboxymethylaminomethyl modification enzyme Gid
13_1_40cm_4_scaffold_1266_28
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(27795..30113)
DNA (2319bp) protein (773aa)
topA; DNA topoisomerase I (EC:5.99.1.2); K03168 DNA topoisomerase I [EC:5.99.1.2] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
topA; DNA topoisomerase I (EC:5.99.1.2)
DNA topoisomerase 1 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABE5_GEMAT
13_1_40cm_4_scaffold_1266_29
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(30219..30737)
DNA (519bp) protein (173aa)
aroK; shikimate kinase (EC:2.7.1.71); K00891 shikimate kinase [EC:2.7.1.71] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
aroK; shikimate kinase (EC:2.7.1.71)
Shikimate kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABE7_GEMAT
13_1_40cm_4_scaffold_1266_30
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(30734..31912)
DNA (1179bp) protein (393aa)
aroC; chorismate synthase (EC:4.2.3.5); K01736 chorismate synthase [EC:4.2.3.5] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
aroC; chorismate synthase (EC:4.2.3.5)
Chorismate synthase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABE8_GEMAT
Displaying items 1-30 of 35 in total

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