ggKbase home page

13_1_40cm_4_scaffold_1266_28

Organism: 13_1_40CM_4_Gemmatimonadetes_65_7

partial RP 19 / 55 MC: 6 BSCG 17 / 51 MC: 4 ASCG 7 / 38 MC: 2
Location: comp(27795..30113)

Top 3 Functional Annotations

Value Algorithm Source
topA; DNA topoisomerase I (EC:5.99.1.2); K03168 DNA topoisomerase I [EC:5.99.1.2] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 65.2
  • Coverage: 764.0
  • Bit_score: 1024
  • Evalue 0.0
topA; DNA topoisomerase I (EC:5.99.1.2) similarity KEGG
DB: KEGG
  • Identity: 57.7
  • Coverage: 776.0
  • Bit_score: 893
  • Evalue 3.50e-257
DNA topoisomerase 1 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABE5_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 57.7
  • Coverage: 776.0
  • Bit_score: 893
  • Evalue 1.20e-256

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RLO_Gemmatimonadetes_68_9 → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 2319
ATGGCGGATTCCGAGCTTACCAACGCCGCTCCTGCAAAGGGCGGCGCACTCGTCATTGTCGAGTCGCCGACCAAGGCGAAGACGATCGGCAAGTACCTGGGGCGTGGCTACACGGTCAAGGCGACCGTGGGGCATCTCCGCGACCTGCCGAAGCGCGAGCTGGGCGTCGACGTCGAGAACGGCTTCACGCCGAAGTACGTGACAATAAAGGAAAAGGCGAAAACCCTGGCCGAGATCAAGAAAGCGGCCAAGGCAGCGGACCGCGTGTTGCTGGCTACGGACCCCGACCGCGAAGGGGAAGCGATCGCCTGGCACGTGGCGTCGCAACTCAACGGCGCCGGCAAGGGACGAATCCGCCGCGTCTTATTCCATGAGATCACGAAGGACGCGGTCGCTGAGGCGCTGTCGAACCCGTTGGACATCGATCAGCGCAAGGTTGACGCCCAACAGGCCCGCCGAGTCCTCGACCGCCTGGTCGGCTACAAGGCGTCGCCGGTGCTGTGGAAGAGCATCAAGACCGGTCTGTCGGCAGGACGCGTGCAAACCGTGGCGCTGCGGCTCATCATCGAGCGTGAAGAGGAGATCCGGAAGTTCGTGCCGCAGGAGTACTGGACGATTGCGGCGGATCTCGAGAAAGGTGGCCAGCCATTCCAGGCGCGGCTGCAGAAGCTCGACGGGCACAAGCCGGACATCAAGACCGAAAAGGCAGCCCGCGATATCGTCGCCGAAGTCGAAAAGCTGCCGTTCGTCGTCACGTCGGTCAGTACTGGCGAGCGCCGCCGGAAGGCGCCGGCGCCCTTCACGACCAGCACCCTGCAGCAGGAAGCCGCGAAACAACTGGGCTTTTCGGCCGGGCGCACCATGCGCGCGGCACAGAAGCTCTATGAAGGCGTGGAGCTCGGCGATCAAGGCTCCGTCGGTCTGATCACGTACATGCGCACCGACTCGGTGCGTGTCTCGGATGCCGCGATCAAGCAGGCGCGCGAGTATATCAACGCACAGTTCGACAAGCGCTACCTGCCCGATGAGCCGAACGTCTACAAGGGGGGCCGCGGCTCGAAGGTGCAGGATGCGCACGAAGCGATCCGCCCGACCGAAGTCGGCCTGCGTCCCGACGACCTGAAGAAGTATCTGGAGCGCGATCTCTTCAAACTGTATCAGCTCATCTGGCGCCGCTTTGTGGCCTCCCAGATGAACCCGGCGATTTACGAAGCCACGAAGGTTGACTTCGATCTGGCAGGCGGCCGGTTCCTATTCCGGGCGACGGGCTCGCGCGTGGTGTTCGACGGCTACCACGCGGTGTACAGCGAAGCCTACGAGCCGGAAGACGCCAAGACGTTGGGCAGCCTCGAGCCGATTCCGGCGCTCGCAGAAGGGGACCGCGTCACGCTCAAGCAGGTCGTGCCGAGCCAGCACTTCACCGAGCCGCCGCCGCGCTACAGCGAAGCGAGCCTGGTGAAAGAGCTCGAGCGGCTGGGGATCGGGCGCCCGTCCACCTATGCGGCGATCATCTCGACGCTACGCACGCGCTGGTATGCGACGGCGAAGGATCGGCGCTTCCATCCCACGCCTCAGGGCGAGACCGTCTGGAAAGTGTTGAAGCGTTCGTTCCCGGAGGTGTTTGAGGTCGGGTTCACGGCGCAGATGGAGACCGAGCTTGACAAGGTCGAAGAGGGCGATCTCGATTGGCAGGCCGTGCTGGGCGACTTCTGGGGCCCGTTCAATCGCGCGCTGGAAGCCGTGGACATCAACAAGATCATCCACGAAGTGCACGACCTGACCGGACTCGACGCCGAGAAGTGTCCCAAGTGCGGCGCGCCGCTCGAGGTGAGAAGCGGCCGGTTCGGTCCGTACATCGCTTGCTCGCGCTACGCGTCGAAGGAGTGCGACTACTCCCGGTCGATCAAGAAAGACAAGGTGCCCGATCGGCCGTCGGATGAGATTTGCAAGGAATGCGGCGCGCCGCTGGTGATCAAGACAGGACGCTACGGCGAGTTTCTCGCTTGCACGCGGTATCCCAAGTGCAAGTACACGCAGCCCGTTCCGCTCGGCATCAAGTGTCCCAAGTGCGGCATCGGCGATCTCGCCGAGCGGCGCACGAAGAAGGGACGGACGTTCTACGGTTGCCTGCGGTATCCGGACTGCGATTATTCCACCTGGAACAAGCCGGTGGTGGTGGCGTGCCCGAGTTGCGGCTTCGTGGGCATGGAAGAGCTGAAGTCCAAGACGACGGGAGAGACGACACGCAAGTGTCTCAAGTGCGGGCACGAAATGCGGGTGGAAGACGCAGCACCGGAGGCGGAGGAGGTGACGTCGTAG
PROTEIN sequence
Length: 773
MADSELTNAAPAKGGALVIVESPTKAKTIGKYLGRGYTVKATVGHLRDLPKRELGVDVENGFTPKYVTIKEKAKTLAEIKKAAKAADRVLLATDPDREGEAIAWHVASQLNGAGKGRIRRVLFHEITKDAVAEALSNPLDIDQRKVDAQQARRVLDRLVGYKASPVLWKSIKTGLSAGRVQTVALRLIIEREEEIRKFVPQEYWTIAADLEKGGQPFQARLQKLDGHKPDIKTEKAARDIVAEVEKLPFVVTSVSTGERRRKAPAPFTTSTLQQEAAKQLGFSAGRTMRAAQKLYEGVELGDQGSVGLITYMRTDSVRVSDAAIKQAREYINAQFDKRYLPDEPNVYKGGRGSKVQDAHEAIRPTEVGLRPDDLKKYLERDLFKLYQLIWRRFVASQMNPAIYEATKVDFDLAGGRFLFRATGSRVVFDGYHAVYSEAYEPEDAKTLGSLEPIPALAEGDRVTLKQVVPSQHFTEPPPRYSEASLVKELERLGIGRPSTYAAIISTLRTRWYATAKDRRFHPTPQGETVWKVLKRSFPEVFEVGFTAQMETELDKVEEGDLDWQAVLGDFWGPFNRALEAVDINKIIHEVHDLTGLDAEKCPKCGAPLEVRSGRFGPYIACSRYASKECDYSRSIKKDKVPDRPSDEICKECGAPLVIKTGRYGEFLACTRYPKCKYTQPVPLGIKCPKCGIGDLAERRTKKGRTFYGCLRYPDCDYSTWNKPVVVACPSCGFVGMEELKSKTTGETTRKCLKCGHEMRVEDAAPEAEEVTS*