ggKbase home page

13_1_40cm_4_scaffold_1266_29

Organism: 13_1_40CM_4_Gemmatimonadetes_65_7

partial RP 19 / 55 MC: 6 BSCG 17 / 51 MC: 4 ASCG 7 / 38 MC: 2
Location: comp(30219..30737)

Top 3 Functional Annotations

Value Algorithm Source
aroK; shikimate kinase (EC:2.7.1.71); K00891 shikimate kinase [EC:2.7.1.71] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 48.6
  • Coverage: 173.0
  • Bit_score: 168
  • Evalue 1.10e-38
aroK; shikimate kinase (EC:2.7.1.71) similarity KEGG
DB: KEGG
  • Identity: 39.9
  • Coverage: 168.0
  • Bit_score: 129
  • Evalue 8.80e-28
Shikimate kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABE7_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 40.6
  • Coverage: 165.0
  • Bit_score: 129
  • Evalue 3.10e-27

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RLO_Gemmatimonadetes_68_9 → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 519
GTGAAAAAACACCTCCTGCTCGTCGGGCTGCCGGGCGCGGGGAAGACAACCGTAGGTCGCATTGTCGCCGAGCGATTGCACGCGGGGCTAGTGGACATCGACACGATCCTGATTCGCAAAGAGGGCAAGCCGATCGCCATGATCTTCGCCGAGAAGGGCGAGCCGGCGTTTCGCGAGATGGAGCGCAAGGAAGTGGAGGCGGCGCTCGCGCATCCACCCGCGGTCATCGTGCCGGGGGGCGGATGGGCGGCACAACCGGGCGCGCTCGAGACTGCAAAGGCCGCGGCATACGTCATTTACCTCATAGCACGTCCGGAGACCGCGACCGCGCGGGCCGTGCCGTCGGGAACCAGGCCGGTGTTAATGGGTGGAGATTCCGAGGCGCAGATGGAGGAGCTGCTCAAGGCGCGAGAACCGTTCTACAAGCTCGCGCATACGACGGTCCATACTGAGGGGAGAGAGGCGGAGCAGGTGGCCGTGGACGTCGTCCGGCTTGCGCAGACCAACGCAGGATGGTAA
PROTEIN sequence
Length: 173
VKKHLLLVGLPGAGKTTVGRIVAERLHAGLVDIDTILIRKEGKPIAMIFAEKGEPAFREMERKEVEAALAHPPAVIVPGGGWAAQPGALETAKAAAYVIYLIARPETATARAVPSGTRPVLMGGDSEAQMEELLKAREPFYKLAHTTVHTEGREAEQVAVDVVRLAQTNAGW*