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13_1_40cm_4_scaffold_13137_12

Organism: 13_1_40CM_4_Gemmatimonadetes_65_7

partial RP 19 / 55 MC: 6 BSCG 17 / 51 MC: 4 ASCG 7 / 38 MC: 2
Location: 10679..11695

Top 3 Functional Annotations

Value Algorithm Source
rpoA; DNA-directed RNA polymerase alpha subunit (EC:2.7.7.6); K03040 DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 69.7
  • Coverage: 350.0
  • Bit_score: 483
  • Evalue 1.80e-133
DNA-directed RNA polymerase subunit alpha n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4J0_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 60.6
  • Coverage: 355.0
  • Bit_score: 403
  • Evalue 1.70e-109
DNA-directed RNA polymerase subunit alpha similarity KEGG
DB: KEGG
  • Identity: 63.7
  • Coverage: 355.0
  • Bit_score: 420
  • Evalue 4.90e-115

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Taxonomy

RLO_Gemmatimonadetes_68_9 → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 1017
GTGATTACGACTCTTGATTTGACGGGGTTGGTCCGGCCGCGGCTCCAGCCGTTGGAGCGGGGCTACGGCTACACATTGGGCAATTCGCTCCGCCGCCTCCTGCTCTCGTCGCTGCGCGGCGCAGCGGTCTGGGCGTTCCGCATCGACGGCGTGGTGCACGAGCACCAGACCATCCCCGGTGTCGTCGAAGACGTCCATCAGATCATTCAGCGCCTCAAGCAGCTGACGCTGGTGCTCGCGCCGGACGTGGATGAGGCGGTCCTCCGCTTCAAAGTGGAGAAGGCCGGGCCGGTCTATGCGCGCGATCTCGAGGCGCACGGCGCGGTGACGATTCAGAACCCCGAGCAGCTGCTCTTTACCGTTCAGGACGACCGCGACATCGCGGGCGAGCTGTACGTGAACAAGGGCCGCGGCTACGTCGAGGCCGAGCAGCATCCGGTGGACCGGACACTCGCCGTCGACGTTGTGCGCGTGGACTCGATCTACAACCCCGTGCGCCGGGCGAATTTCACCGTGGCGGAGACGCGCGTCGGCCAGCGCACCGACTACGACCGGCTCACGCTCACCGTCGAGACCAACGGCACGATCTCGCCCGAGGACGCGGTGGCGTATGCCGCGGCGCTCGCGCAGGAGCACTTCCGGTTCTTCGTCGACTTCGGCAAGGTGCCGATCGTCCCGGGGGAACCGGGCGGGGCGGGCAACGGTGGATCCGAAGGCGGGCGGCTGCGAGACGTGCTGAGCCGCGCCATCGACGACGCCGGTTTGTCGGTGCGGTCGGTGAACTCGCTCAAGAACTCGAACATCCGGACGCTGGGCGATCTCGTCCGCTACAAGGAAGACGATCTCCTGAAGGTGAAGAACGTCGGCGAGAAGGCACTCGGGGAAATCGCGGAATTGCTGCGTCGTGAGGGCTTGAACTTCGGGATGCAGCTCGAGGAGATGCCGGGCGGCGAGATTCGCATCGTAGATCCGGGCAGCGCGCCGCAAGCGCAGCTCACGGGGACCGAGGAAGAGTAA
PROTEIN sequence
Length: 339
VITTLDLTGLVRPRLQPLERGYGYTLGNSLRRLLLSSLRGAAVWAFRIDGVVHEHQTIPGVVEDVHQIIQRLKQLTLVLAPDVDEAVLRFKVEKAGPVYARDLEAHGAVTIQNPEQLLFTVQDDRDIAGELYVNKGRGYVEAEQHPVDRTLAVDVVRVDSIYNPVRRANFTVAETRVGQRTDYDRLTLTVETNGTISPEDAVAYAAALAQEHFRFFVDFGKVPIVPGEPGGAGNGGSEGGRLRDVLSRAIDDAGLSVRSVNSLKNSNIRTLGDLVRYKEDDLLKVKNVGEKALGEIAELLRREGLNFGMQLEEMPGGEIRIVDPGSAPQAQLTGTEEE*