ggKbase home page

13_1_40cm_4_scaffold_3225_4

Organism: 13_1_40CM_4_Gemmatimonadetes_65_7

partial RP 19 / 55 MC: 6 BSCG 17 / 51 MC: 4 ASCG 7 / 38 MC: 2
Location: 6320..7435

Top 3 Functional Annotations

Value Algorithm Source
Efflux transporter, RND family, MFP subunit n=1 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1Y1D7_LEPCP similarity UNIREF
DB: UNIREF100
  • Identity: 38.4
  • Coverage: 365.0
  • Bit_score: 228
  • Evalue 1.10e-56
RND family efflux transporter MFP subunit Tax=GWC2_Gemmatimonadetes_71_10_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 56.7
  • Coverage: 365.0
  • Bit_score: 388
  • Evalue 1.50e-104
RND family efflux transporter MFP subunit similarity KEGG
DB: KEGG
  • Identity: 38.4
  • Coverage: 365.0
  • Bit_score: 228
  • Evalue 3.00e-57

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

GWC2_Gemmatimonadetes_71_10_curated → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 1116
ATGTCGTACCGTTCACTCGCTGTATTGCTCGTCCTCGCGGCCGCGTGCAACAAGGCCAAGTCCGCAGCCCCCGGCGGTGCCGGCGGTATGCCGCCGATGCCGGTCGAGGTCTCCGCGGTCATTCGCGATACCGTCGTGGACGCAATCGCCGCCACAGGACAGATCGAGGCCGTGCAGTCCATCGAGCTGCGTCCCGAGGTGCAGGGGCGCATCATCGATATCCTCGTGCGCGAAGGGCAGCCGGTCGACGCCGGCACCGCGCTGTTCAAGGTGGACGACGCGGAGCTGAAGGCGCAGGTCGCCCAGGCCGACGCGGAGCGCCAGTTGGCGCGGCAGGCGCTGGAGCGCACCAAACAGCTGATGGCGCAGCACGCATCGTCGACGTCGGATTTGGAGCAGGCGCAAGCGAGGTCGCAGGGCGCCGACGCGAACTATGATCTGCTGAAGACGCGGCTCGACCGGACGGTCGTGCGCGCGCCATTCGCCGGCGTCGTGGGCCGGCGGCTCGTCAGCATCGGCACTTACGTGAGCAATCAGACGCCGCTCATCACGCTACAGTCGGTGAATCCTCAGCACGCCAGCTTCCAGGTGCCCGAGCGCTATGCCGACCGGTTGCGCCGCGGGCAACTGGTGAGCTTCCAGGTCGCGGCGCTGCCGGGCAAGAATTTCTCGGGTGAGGTGGTGTTCGTGGACCCGGTGGTCGAGCTGCCGGCGCGCACCATCCTCATCAAGGCGCGGGTCCCGAATCCCGAGCACCAGCTCCAGGCGGGGATGTTCATCGAGGCGCGCCTCGCGACGGACATCCGTCCCAACGCCCTCGTCGTGCCGGAGGACGCGATCCTGCCGGTTCAGGGCTCGACCTACGTCTGGGTCGTCAAGGATGGAAAAGCCGACCGCCGCCAGGTGACGATCGGCGTCCGGACGGCGGGATGGGCCGAGATCGAGGGCGGCGGCGTGCAGGCGGGCGATCAGGTCGTCGTCGGCGGGCTCGAGCGGCTGTTCCCGGGCGCGCCGGTGATGCCGCAGGTCGTCGAGCGCCACCGTGGCGCCCCGACCGGCGCGGAGTCTACGGCGGCGACGGGGGCGGCGCGGGGGGGGACCCCGAAGACGCGCTAG
PROTEIN sequence
Length: 372
MSYRSLAVLLVLAAACNKAKSAAPGGAGGMPPMPVEVSAVIRDTVVDAIAATGQIEAVQSIELRPEVQGRIIDILVREGQPVDAGTALFKVDDAELKAQVAQADAERQLARQALERTKQLMAQHASSTSDLEQAQARSQGADANYDLLKTRLDRTVVRAPFAGVVGRRLVSIGTYVSNQTPLITLQSVNPQHASFQVPERYADRLRRGQLVSFQVAALPGKNFSGEVVFVDPVVELPARTILIKARVPNPEHQLQAGMFIEARLATDIRPNALVVPEDAILPVQGSTYVWVVKDGKADRRQVTIGVRTAGWAEIEGGGVQAGDQVVVGGLERLFPGAPVMPQVVERHRGAPTGAESTAATGAARGGTPKTR*