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13_1_40cm_4_scaffold_3225

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_3225_1
Chloroherpeton thalassium, Chloroherpeton, Chlorobiales, Chlorobia, Chlorobi, Bacteria

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comp(3..1610)
DNA (1608bp) protein (536aa)
Peptidase M1 membrane alanine aminopeptidase n=1 Tax=Chloroherpeton thalassium (strain ATCC 35110 / GB-78) RepID=B3QYL7_CHLT3
peptidase M1 membrane alanine aminopeptidase
Peptidase M1 membrane alanine aminopeptidase {ECO:0000313|EMBL:ACF13645.1}; TaxID=517418 species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chloroherpeton.;" source="Chloroherpeton t
13_1_40cm_4_scaffold_3225_trna_1
unknown

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comp(1646..1728)
DNA (83bp)
transferRNA
13_1_40cm_4_scaffold_3225_2
RBG_16_Zixibacteria_53_22_curated, Zixibacteria, Bacteria

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1954..5025
DNA (3072bp) protein (1024aa)
AcrB/AcrD/AcrF family protein; K03296 hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family Tax=RBG_16_Zixibacteria_53_22_curated
AcrB/AcrD/AcrF family protein; K03296 hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family id=24506371 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Methylococcus capsulatus genus=Methylococcus taxon_order=Methylococcales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
hydrophobic/amphiphilic exporter-1
13_1_40cm_4_scaffold_3225_3
Myxococcus fulvus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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5025..6320
DNA (1296bp) protein (432aa)
Putative outer membrane macrolide efflux protein n=1 Tax=Myxococcus fulvus (strain ATCC BAA-855 / HW-1) RepID=F8CKE9_MYXFH
putative outer membrane macrolide efflux protein
Protein CyaE {ECO:0000256|PIRNR:PIRNR001892}; TaxID=483219 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus fulvu
13_1_40cm_4_scaffold_3225_4
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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6320..7435
DNA (1116bp) protein (372aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1Y1D7_LEPCP
RND family efflux transporter MFP subunit Tax=GWC2_Gemmatimonadetes_71_10_curated
RND family efflux transporter MFP subunit
13_1_40cm_4_scaffold_3225_5
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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comp(7432..9753)
DNA (2322bp) protein (774aa)
Uncharacterized protein n=1 Tax=Chlorobium ferrooxidans DSM 13031 RepID=Q0YR30_9CHLB
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
Protein of unknown function DUF2723
13_1_40cm_4_scaffold_3225_6
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(9849..11957)
DNA (2109bp) protein (703aa)
Hypothetical membrane protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3K8_GEMAT
Protein of unknown function DUF2723
Uncharacterized protein {ECO:0000313|EMBL:AHG90525.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_4_scaffold_3225_7
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(11972..12712)
DNA (741bp) protein (247aa)
purH; phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase (EC:2.1.2.3 3.5.4.10); K00602 phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.
Bifunctional purine biosynthesis protein PurH n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7W1_GEMAT
Bifunctional purine biosynthesis protein purH
13_1_40cm_4_scaffold_3225_8
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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comp(13475..13993)
DNA (519bp) protein (173aa)
Putative M42 glutamyl aminopeptidase n=1 Tax=uncultured marine microorganism HF4000_009G21 RepID=B3T1C3_9ZZZZ
peptidase M42 family protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
peptidase M42 family protein
13_1_40cm_4_scaffold_3225_9
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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comp(14454..15194)
DNA (741bp) protein (247aa)
Peptidase family protein n=1 Tax=Terriglobus roseus (strain DSM 18391 / NRRL B-41598 / KBS 63) RepID=I3ZEB7_TERRK
Putative M42 glutamyl aminopeptidase Tax=GWC2_Gemmatimonadetes_71_10_curated
peptidase family protein
13_1_40cm_4_scaffold_3225_10
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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comp(15253..15822)
DNA (570bp) protein (190aa)
purN; phosphoribosylglycinamide formyltransferase (EC:2.1.2.2); K11175 phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] Tax=GWC2_Gemmatimonadetes_71_10_curated
Phosphoribosylglycinamide formyltransferase n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SG23_RHOMR
phosphoribosylglycinamide formyltransferase
13_1_40cm_4_scaffold_3225_11
Brevundimonas abyssalis, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(15819..16862)
DNA (1044bp) protein (348aa)
Bacterial pre-peptidase C-terminal domain protein n=1 Tax=Brevundimonas abyssalis TAR-001 RepID=U2ZCN8_9CAUL
Bacterial pre-peptidase C-terminal domain protein {ECO:0000313|EMBL:GAD58812.1}; TaxID=1391729 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.
peptidase C14 caspase catalytic subunit p20
Displaying 12 items

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