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13_1_40cm_4_scaffold_446_9

Organism: 13_1_40CM_4_Gemmatimonadetes_65_7

partial RP 19 / 55 MC: 6 BSCG 17 / 51 MC: 4 ASCG 7 / 38 MC: 2
Location: 9107..13240

Top 3 Functional Annotations

View all annotations
Value Algorithm Source
isopropylmalate isomerase large subunit (EC:4.2.1.33) similarity KEGG
DB: KEGG
  • Identity: 72.8
  • Coverage: 460.0
  • Bit_score: 680
  • Evalue 8.20e-193
3-isopropylmalate dehydratase large subunit {ECO:0000255|HAMAP-Rule:MF_01026}; EC=4.2.1.33 {ECO:0000255|HAMAP-Rule:MF_01026};; Alpha-IPM isomerase {ECO:0000255|HAMAP-Rule:MF_01026}; Short=IPMI {ECO:00 similarity UNIPROT
DB: UniProtKB
  • Identity: 72.8
  • Coverage: 460.0
  • Bit_score: 680
  • Evalue 4.10e-192
3-isopropylmalate dehydratase large subunit n=1 Tax=Symbiobacterium thermophilum (strain T / IAM 14863) RepID=LEUC_SYMTH similarity UNIREF
DB: UNIREF100
  • Identity: 72.8
  • Coverage: 460.0
  • Bit_score: 680
  • Evalue 2.90e-192

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Taxonomy

Symbiobacterium thermophilum → Symbiobacterium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 4134
ATGAGCTCGACGGGAACGCGTATTTTCTACGATACCGACGCCGATCCTGCCCGGCTGCAAAACCGCGTTGTCGCCGTCATCGGATACGGCAGCCAGGGTCACGCGCATGCGCTCAACCTGCGGGATTCGGGTGTCGGCGCGCGCGTGCTCGTGGGGCTGCGCCCGGGTGGACAGTCGTGGGAGCGGGCCCGCGCGGAGCAGCTGGACGTCCGCCCGGTGGCTGAAGCGGCGCGCGCGGCCGACGTCATCATGATGCTGGTCCCCGACCAGGAGGCGCGCGCGGTGTACGAGGGCGGCATCGCGCCGGCCCTGCAGCGGGGCAAGACGCTCCTCTTCGCCCACGGGTTCAACATCCATTTCCGCGAGATCGCGCCCCCGGCCGGTGTGGACGTCGCCATGATCGCCCCCAAGTCCCCCGGGCACCTGGTGCGCAGCGAGTTCCAGGCGGGCCGGGGCGTGCCGGCGCTCGTGGCGGTGCATCAGGACGCGAGCGGCAATGCGTTGGCCGATGCGCTCGCCTATGCCGCGGGGATCGGCTGCGCGCGCGCCGGCGTGTTCGAGACGACGTTCCGCGAGGAGACCGAGACCGACCTGTTCGGCGAGCAGTCCGTGCTGTGCGGCGGTGTCACCGCGCTGATTCAGGCCGGCTTCGAGACGCTCACGGCCGCGGGGTACGCGCCCGAAATCGCCTACTTCGAGTGCATGCACGAGCTCAAGCTGATCGTGGACCTGATGTATCGCGGCGGCATGAAGTTCATGCGGTACTCGATCAGCGACACCGCCGAATACGGCGATTACACCCGGGGTCCGAAGATCGTGACGCCGGAAGTGCGCGCCGCGATGCAGCGTATCCTGGCCGACATCCAGTCCGGCAGCTTCGCGCGGGAGTGGATCGCCGAGTCCCGCAGCGGGGGCCGGCGGTTCGAGGCATTGCGCAAGGCGGGCGCGGAGCATCCCATCGAGCAGGTCGGCGCCAAGCTGCGCGCTATGATGCCCTGGACGGAAGAGGGGAAGGGGGCTAGGGGCTCGGGGCTAGGGGATACCCGAGCCCCTCAGGGCATGACGGCAAGGACGCTGTTCGACAAGGTCTGGGACGCGCACGTCGTCCATCAGCTCGCGGAGGGCCCGGCGCTCTTGTACGTGGACCTGCATCTGGTCCACGAGGTGACGTCGCCACAGGCGTTCGAGGGATTGCGGCAGGCGGGGCGCCGGGTGCGCCAGCCGGCGCTGACGGTGGCGACCGTGGACCATAACGTCCCCACGGGGGACCGCGCGGCGCCGATTGCCGATCCCATTGCCGCGCGGCAGCTCGAGGCGCTCGCGGCGAATGCGCGTGACTTCGGGCTGGAGCTGTTCGACCTCCGGTCGCCGCAGCAAGGCATCGTGCACGTGATCGGCCCCGAGCTGGGCCTCACCCAGCCGGGCATGGTGATCGTGTGCGGCGACTCCCACACTGCTACCCACGGCGCCTTCGGGGCGCTGGCCCTGGGAATCGGGACCAGCGAGGTCGAGCACGTGCTCGCGACGCAATGCCTCGTGTGGTCCAAGCCCGGCACGATGGAGGCCCGCGTCTCGGGGGCGCTCGCGCCCGGAGTCACGGCCAAAGACCTGATCCTCGCGTTGATCGGCCGCATCGGGACGGCCGGCGCCACGGGTCACGTCATTGAATACACGGGCGAGGCGATCCGCGCCCTCTCCATGGAAGAGCGCATGACGGTGTGCAACATGTCGATCGAGGCGGGTGCGCGGGCCGGGATGATCGCCCCCGATAAGACGACCGTTGCGTATCTCGCCGGCCGGCCCCGGGCGCCGCGCGGGGCGGCGTGGGATCGCGCCGTTGCCAAGTGGCGGGACCTCCACACCGATCCCGGCGCCACGTACGACAAGCAGATCGAGCTCGATGCCGCGGAGGTGGCACCTCAGGTGACGTGGGGAACGAACCCCGGCATGGTCACTCCGGTGACCGGTCGCGTGCCCAGCCCCGCCGACTTCACCTCTGACGCCGAGCAGCGCGCGGTCACGCGGGCGCTCGAGTACATGGGGCTCGCCCCCGGTACGCCGCTCGAGGGGCTCCCGATCGACCGGGTGTTTCTGGGCTCTTGCACGAACGCGCGGATCGAGGACCTGCGTGCCGCCGCCCGCACCGTCCGGGGCCGGCACGTTGCGACGGGCGTCCGTGCCATGGTGGTCCCGGGATCGCAGCAGGTGAAGGCGCAGGCGGAGCGAGAAGGGCTGGACCGCGTGTTCAGCGAGGCGGGCTTCGAGTGGCGCAACGCCGGATGCTCGATGTGTCTCGGCATGAATCCCGACGTGCTGCAGAGCGGGGAGCGCTGCGCCTCGACGTCGAACCGCAACTTCGAGGGGCGCCAGGGACGCGGTGGGCGCACCCATCTGATGAGCCCGCCCATGGCGGCGGCCGCCGTAAGTGGGCGGGGGAGCTCGCGGCCCGATGATGGAGCCGTTCGTGCGCCACACCGGCCGGCTGGCCGCGCTGGCGCGTGCCAACGTGGACACCGACCAGATCATTCCGAAGCAATTCCTCAAGCGGGTGGAGCGCACCGGGTTCGGGCCGGCCCTGTTCCACGACTGGCGGTTCCGGCCGGACGGCAGCCCGAATCCGGAATTCGAGCTCAATCACCCCGCCGCGTGCGGAGCCACGCTCCTCGTCGCCGGCGAGAACTTCGGCTGCGGCTCGTCGCGCGAGCACGCGGTCTGGGCGCTCCGCGAGTACGGCTTCCGCGCGATCCTCGCGCATTCCTTCGCGGATATTTTTTTCGCGAACTGCTGTCAGAACGGGCTGGTCCCGGTACGACTCCTGCCCCAAGAGATCGCCGAGCTGTTCCGCCGCCATCAGGCGGCCGGCGGCGAGTATCAGCTCACCGTCGACCTCGAAGAGCAGCGCGTGCACGACGGCCTGGGGTTCCGCACCACGTTTTCGATGGAGCCCTACCGCCGGGAGATGCTGCTCCACGGGCTCGACGAGATCGGGCGGACCCTGCGCTTCGAGGACCGGATCGGAGCCTACGAGAAGGGCCGGGCGTGAAGCAGTACTCGATCGCGGTGCTTCCCGGCGACGGGATCGGGCCCGAGGTGATCGCGGAGGCCGAGCGGATGCTTACGGCCGTCGGCGACCGCTTCGGTATCGACTTCACGCTGCGGCGCTTCCCCATTGGAGCGGCCGGTGTGGCCGCAGCCGGGGATCCGTTTCCCGAAGCGACGCGTGCCGCGGTGACACGGGCCGACGCTGTATTGCTCGGCGCGGTTGGCGACCCGTCGCTCGACCAGGCACCCCGCCACTTGAAGCCCGAATCCGGCCTGCTGGCCCTGCGCGCGCAGCTCGGGGTGTATGCGAACCTGCGCCCCGTGCAGGTGTTGCCCGCGCTGGTAGACCGGTCACCGCTCAAGGCGGACCGGCTCGAAGGCGTCGACGTGCTGATTGTGCGGGAGCTCACGGGCGGGCTCTACTACGGCGAACCGCGCGGACGCGAAGGTGCCTCGGCCGTAAACACCCTGCGCTACTCCGCGGCCGAGATCAAGCGCGTGGCGCGCGTCGCCTTCGAATCGGCGCGGCAACGGCGGGGGCACGTCACGTCGGTCGACAAGGCCAACGTGCTGGAAGTGTCCCAGTTGTGGCGGGAAACGGTGACGCGCGTCGGCCAGGACTACCCTGATGTGCAGCTCGATCACCTGTACGTCGATACTGCCGCCATGCGTCTCGTGGCCGACCCCACGGCGTTCGACGTCCTCCTCACCGAGAACATGTTCGGGGACATCCTGAGCGACGAGGCCGCGGTGTTGGTCGGCTCGCTCGGCCTGCTGCCCTCGGCCTCACTGGGCGAGGGCGCGGGGTTGTTCGAGCCGATTCACGGATCCGCCCCGGACATCGCCGGCCGCGATGTCGCGAACCCGATCGGCGCGATTGCCACGGTCGCCATGCTGCTGCGCCACGGGCTCAGCTTGGCGGAGCCCGCCGCCGCCGTGGAGCGTGCGATCTCGCTGGCGTTGGAGCAGGGGGCGCGGACGCGGGATATCGCCGAGCCATCTGCGCAGGTGCTCGGAACTCAGGCAATGGGATCGCGCGTCGCTGGCTTGATCTCCGAGACCCAGCGTTCGCGGGCGTCGGTGGCGCCCTAG
PROTEIN sequence
Length: 1378
MSSTGTRIFYDTDADPARLQNRVVAVIGYGSQGHAHALNLRDSGVGARVLVGLRPGGQSWERARAEQLDVRPVAEAARAADVIMMLVPDQEARAVYEGGIAPALQRGKTLLFAHGFNIHFREIAPPAGVDVAMIAPKSPGHLVRSEFQAGRGVPALVAVHQDASGNALADALAYAAGIGCARAGVFETTFREETETDLFGEQSVLCGGVTALIQAGFETLTAAGYAPEIAYFECMHELKLIVDLMYRGGMKFMRYSISDTAEYGDYTRGPKIVTPEVRAAMQRILADIQSGSFAREWIAESRSGGRRFEALRKAGAEHPIEQVGAKLRAMMPWTEEGKGARGSGLGDTRAPQGMTARTLFDKVWDAHVVHQLAEGPALLYVDLHLVHEVTSPQAFEGLRQAGRRVRQPALTVATVDHNVPTGDRAAPIADPIAARQLEALAANARDFGLELFDLRSPQQGIVHVIGPELGLTQPGMVIVCGDSHTATHGAFGALALGIGTSEVEHVLATQCLVWSKPGTMEARVSGALAPGVTAKDLILALIGRIGTAGATGHVIEYTGEAIRALSMEERMTVCNMSIEAGARAGMIAPDKTTVAYLAGRPRAPRGAAWDRAVAKWRDLHTDPGATYDKQIELDAAEVAPQVTWGTNPGMVTPVTGRVPSPADFTSDAEQRAVTRALEYMGLAPGTPLEGLPIDRVFLGSCTNARIEDLRAAARTVRGRHVATGVRAMVVPGSQQVKAQAEREGLDRVFSEAGFEWRNAGCSMCLGMNPDVLQSGERCASTSNRNFEGRQGRGGRTHLMSPPMAAAAVSGRGSSRPDDGAVRAPHRPAGRAGACQRGHRPDHSEAIPQAGGAHRVRAGPVPRLAVPAGRQPESGIRAQSPRRVRSHAPRRRRELRLRLVARARGLGAPRVRLPRDPRAFLRGYFFRELLSERAGPGTTPAPRDRRAVPPPSGGRRRVSAHRRPRRAARARRPGVPHHVFDGALPPGDAAPRARRDRADPALRGPDRSLREGPGVKQYSIAVLPGDGIGPEVIAEAERMLTAVGDRFGIDFTLRRFPIGAAGVAAAGDPFPEATRAAVTRADAVLLGAVGDPSLDQAPRHLKPESGLLALRAQLGVYANLRPVQVLPALVDRSPLKADRLEGVDVLIVRELTGGLYYGEPRGREGASAVNTLRYSAAEIKRVARVAFESARQRRGHVTSVDKANVLEVSQLWRETVTRVGQDYPDVQLDHLYVDTAAMRLVADPTAFDVLLTENMFGDILSDEAAVLVGSLGLLPSASLGEGAGLFEPIHGSAPDIAGRDVANPIGAIATVAMLLRHGLSLAEPAAAVERAISLALEQGARTRDIAEPSAQVLGTQAMGSRVAGLISETQRSRASVAP*