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13_1_40cm_4_scaffold_10640

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_10640_1
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(3..497)
DNA (495bp) protein (165aa)
hydroxyethylthiazole kinase and thiamine-phosphate pyrophosphorylase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
Thiamine-phosphate synthase id=4614178 bin=GWC2_Methylomirabilis_70_16 species=Moorella thermoacetica genus=Moorella taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
thiamine-phosphate pyrophosphorylase
13_1_40cm_4_scaffold_10640_2
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(497..1834)
DNA (1338bp) protein (446aa)
acetyl-CoA carboxylase, biotin carboxylase; K01961 acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
acetyl-CoA carboxylase, biotin carboxylase (EC:6.3.4.14)
Acetyl-CoA carboxylase, biotin carboxylase id=4973966 bin=GWA2_Methylomirabilis_73_35 species=Ammonifex degensii genus=Ammonifex taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_4_scaffold_10640_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(1932..3203)
DNA (1272bp) protein (424aa)
peptidase M, neutral zinc metallopeptidase, zinc-binding site Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Tetratricopeptide TPR_2 repeat protein id=4973965 bin=GWA2_Methylomirabilis_73_35 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
TPR repeat-containing protein
13_1_40cm_4_scaffold_10640_4
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(3210..3686)
DNA (477bp) protein (159aa)
acetyl-CoA carboxylase, biotin carboxyl carrier protein; K02160 acetyl-CoA carboxylase biotin carboxyl carrier protein Tax=GWA2_Rokubacteria_73_35_curated
accB; acetyl Coa carboxylase, biotin carboxyl carrier protein; K02160 acetyl-CoA carboxylase biotin carboxyl carrier protein id=14625690 bin=bin7_NC10_sister species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=bin7_NC10_sister organism_group=NC10
accB; acetyl-CoA carboxylase, biotin carboxylcarrier protein AccB
13_1_40cm_4_scaffold_10640_5
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(3686..4258)
DNA (573bp) protein (191aa)
elongation factor P; K02356 elongation factor P Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Elongation factor P id=4614254 bin=GWC2_Methylomirabilis_70_16 species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
translation elongation factor P
13_1_40cm_4_scaffold_10640_6
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(4265..4936)
DNA (672bp) protein (224aa)
TPR domain-containing protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
hypothetical protein id=14625688 bin=bin7_NC10_sister species=Geobacter daltonii genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
13_1_40cm_4_scaffold_10640_7
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(4940..6013)
DNA (1074bp) protein (358aa)
aroB; 3-dehydroquinate synthase (EC:4.2.3.4); K01735 3-dehydroquinate synthase [EC:4.2.3.4] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
3-dehydroquinate synthase (EC:4.2.3.4)
3-dehydroquinate synthase id=4614256 bin=GWC2_Methylomirabilis_70_16 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Displaying 7 items

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