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13_1_40cm_4_scaffold_111761

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_111761_1
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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comp(1..867)
DNA (867bp) protein (289aa)
FAD linked oxidase-like protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
FAD linked oxidase-like protein id=2732495 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
FAD linked oxidase-like protein
13_1_40cm_4_scaffold_111761_2
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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comp(886..2361)
DNA (1476bp) protein (492aa)
glcD; glycolate oxidase subunit GlcD (EC:1.1.3.15) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
glcD; glycolate oxidase subunit GlcD (EC:1.1.3.15)
Glycolate oxidase, subunit GlcD id=2732498 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_4_scaffold_111761_3
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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comp(2424..2909)
DNA (486bp) protein (162aa)
transketolase central region; K00163 pyruvate dehydrogenase E1 component [EC:1.2.4.1] Tax=GWA2_Rokubacteria_73_35_curated
Transketolase central region id=3577277 bin=GWA2_Methylomirabilis_73_35 species=Roseiflexus castenholzii genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
transketolase
13_1_40cm_4_scaffold_111761_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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comp(3669..4607)
DNA (939bp) protein (313aa)
transketolase, central region; K00163 pyruvate dehydrogenase E1 component [EC:1.2.4.1] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Transketolase central region id=3577277 bin=GWA2_Methylomirabilis_73_35 species=Roseiflexus castenholzii genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
transketolase, central region
13_1_40cm_4_scaffold_111761_5
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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comp(4631..5164)
DNA (534bp) protein (178aa)
livF; branched-chain amino acid transport ATP-binding protein livF; K01996 branched-chain amino acid transport system ATP-binding protein Tax=GWA2_Rokubacteria_73_35_curated
High-affinity branched-chain amino acid transport ATP-binding proteinlivF (LIV-I protein F) id=3577280 bin=GWA2_Methylomirabilis_73_35 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
high-affinity branched-chain amino acid transport ATP-binding proteinlivF (LIV-I protein F)
13_1_40cm_4_scaffold_111761_6
unknown

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6428..7333
DNA (906bp) protein (302aa)

This feature has no annotations

13_1_40cm_4_scaffold_111761_7
R_Rokubacteria_69_13, Rokubacteria, Bacteria

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comp(7162..7809)
DNA (648bp) protein (216aa)
livH3; ABC transporter permease Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
livK1; high-affinity branched-chain amino acid ABC transporter permease id=14625864 bin=bin7_NC10_sister species=Cupriavidus necator genus=Cupriavidus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
inner-membrane translocator
Displaying 7 items

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