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13_1_40cm_4_scaffold_11829

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_11829_1
unknown

Not on your lists

comp(3..92)
DNA (90bp) protein (30aa)

This feature has no annotations

13_1_40cm_4_scaffold_11829_2
unknown

Not on your lists

comp(146..433)
DNA (288bp) protein (96aa)

This feature has no annotations

13_1_40cm_4_scaffold_11829_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(448..1548)
DNA (1101bp) protein (367aa)
lpD; dihydrolipoyl dehydrogenase (E3 component of pyruvate and 2-oxoglutarate dehydrogenases complexes) (Dihydrolipoamide dehydrogenase) (EC:1.8.1.4) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
lpD; dihydrolipoyl dehydrogenase (E3 component of pyruvate and 2-oxoglutarate dehydrogenases complexes) (Dihydrolipoamide dehydrogenase) (EC:1.8.1.4) id=14627457 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
dihydrolipoamide dehydrogenase
13_1_40cm_4_scaffold_11829_4
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(1927..3270)
DNA (1344bp) protein (448aa)
pdhC; dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex (E2) (Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex) (EC:2.3.1.12) id=14627458 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
pdhC; dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex (E2) (Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex) (EC:2.3.1.12) Tax=
pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase
13_1_40cm_4_scaffold_11829_5
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(3273..4262)
DNA (990bp) protein (330aa)
pdhB; Pyruvate dehydrogenase E1 component subunit beta (EC:1.2.4.1) Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
pdhB; Pyruvate dehydrogenase E1 component subunit beta (EC:1.2.4.1)
Pyruvate dehydrogenase E1 component subunit beta id=4688355 bin=GWC2_Methylomirabilis_70_24 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
13_1_40cm_4_scaffold_11829_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(4264..5274)
DNA (1011bp) protein (337aa)
pdhA; Pyruvate dehydrogenase E1 component subunit alpha (EC:1.2.4.1) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
pdhA; Pyruvate dehydrogenase E1 component subunit alpha (EC:1.2.4.1) id=14627460 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
pdhA; Pyruvate dehydrogenase E1 component subunit alpha (EC:1.2.4.1)
13_1_40cm_4_scaffold_11829_7
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(5287..5589)
DNA (303bp) protein (101aa)
NADH-ubiquinone oxidoreductase subunit 4L; K00340 NADH-quinone oxidoreductase subunit K [EC:1.6.5.3] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
NADH-quinone oxidoreductase subunit K id=4688381 bin=GWC2_Methylomirabilis_70_24 species=uncultured Chloroflexi bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
NADH-ubiquinone oxidoreductase subunit 4L
13_1_40cm_4_scaffold_11829_8
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(5593..6087)
DNA (495bp) protein (165aa)
NADH-ubiquinone/plastoquinone oxidoreductase chain 6; K00339 NADH-quinone oxidoreductase subunit J [EC:1.6.5.3] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
NADH-ubiquinone/plastoquinone oxidoreductase subunit 6; K00339 NADH-quinone oxidoreductase subunit J [EC:1.6.5.3] id=14627462 bin=bin7_NC10_sister species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=bin7_NC10_sister organism_group=NC10
NADH-ubiquinone/plastoquinone oxidoreductase chain 6
13_1_40cm_4_scaffold_11829_9
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(6087..6626)
DNA (540bp) protein (180aa)
4Fe-4S ferredoxin; K00338 NADH-quinone oxidoreductase subunit I [EC:1.6.5.3] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
4Fe-4S ferredoxin; K00338 NADH-quinone oxidoreductase subunit I [EC:1.6.5.3] id=14627537 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Omnitrophica tax=bin7_NC10_sister organism_group=NC10
4Fe-4S ferredoxin
13_1_40cm_4_scaffold_11829_10
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(6623..6775)
DNA (153bp) protein (51aa)
nuoH_[H]; NADH-ubiquinone oxidoreductase chain H (EC:1.6.5.3) Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
nuoH; NADH-quinone oxidoreductase chain H (EC:1.6.99.5); K00337 NADH-quinone oxidoreductase subunit H [EC:1.6.5.3] id=14627536 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Omnitrophica tax=bin7_NC10_sister organism_group=NC10
NADH:ubiquinone oxidoreductase subunit H
13_1_40cm_4_scaffold_11829_11
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(7686..9323)
DNA (1638bp) protein (546aa)
Molybdopterin oxidoreductase Fe4S4 region Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
NADH dehydrogenase I, G subunit (75 kDa) id=3990316 bin=GWC2_Methylomirabilis_70_16 species=uncultured bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Molybdopterin oxidoreductase Fe4S4 region
13_1_40cm_4_scaffold_11829_12
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(9316..10596)
DNA (1281bp) protein (427aa)
NADH-quinone oxidoreductase subunit F (EC:1.6.99.5); K00335 NADH-quinone oxidoreductase subunit F [EC:1.6.5.3] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
nuoF; NADH-quinone oxidoreductase subunit F (NADH dehydrogenase I, chain F) (NDH-1, chain F) (EC:1.6.5.3 1.6.99.5) id=14627534 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
NADH dehydrogenase I subunit F
13_1_40cm_4_scaffold_11829_13
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(10593..11150)
DNA (558bp) protein (186aa)
NADH-quinone oxidoreductase subunit E; K00334 NADH-quinone oxidoreductase subunit E [EC:1.6.5.3] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
nuoE; NADH dehydrogenase (ubiquinone) (EC:1.6.5.3)
NADH dehydrogenase I subunit E id=3990310 bin=GWC2_Methylomirabilis_70_16 species=uncultured prokaryote genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
13_1_40cm_4_scaffold_11829_14
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(11147..11728)
DNA (582bp) protein (194aa)
nuoD; NADH dehydrogenase I subunit D; K00333 NADH-quinone oxidoreductase subunit D [EC:1.6.5.3] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
NADH dehydrogenase I subunit D (EC:1.6.99.5); K00333 NADH-quinone oxidoreductase subunit D [EC:1.6.5.3] id=14627532 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Omnitrophica tax=bin7_NC10_sister organism_group=NC10
NADH dehydrogenase subunit D (EC:1.6.99.5)
Displaying 14 items

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