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13_1_40cm_4_scaffold_13869

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_13869_1
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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3..263
DNA (261bp) protein (87aa)
4-vinyl reductase 4VR id=1703903 bin=GWA2_Methylomirabilis_73_35 species=Desulfatibacillum alkenivorans genus=Desulfatibacillum taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
4-vinyl reductase 4VR Tax=GWA2_Rokubacteria_73_35_curated
13_1_40cm_4_scaffold_13869_2
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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260..1138
DNA (879bp) protein (293aa)
livM; branched-chain amino acid ABC transporter system, permease protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Branched-chain amino acid ABC transporter permease protein id=1703897 bin=GWA2_Methylomirabilis_73_35 species=Symbiobacterium thermophilum genus=Symbiobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ABC transporter permease
13_1_40cm_4_scaffold_13869_3
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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1138..2103
DNA (966bp) protein (322aa)
Hypothetical conserved protein id=1703896 bin=GWA2_Methylomirabilis_73_35 species=uncultured prokaryote genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
inner-membrane translocator; K01998 branched-chain amino acid transport system permease protein Tax=GWA2_Rokubacteria_73_35_curated
inner-membrane translocator
13_1_40cm_4_scaffold_13869_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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2368..3528
DNA (1161bp) protein (387aa)
putative branched chain amino acid ABC transporter substrate-binding protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative branched chain amino acid ABC transporter substrate-binding protein id=4849842 bin=GWC2_Methylomirabilis_70_16 species=Tistrella mobilis genus=Tistrella taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
putative branched chain amino acid ABC transporter substrate-binding protein
13_1_40cm_4_scaffold_13869_5
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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3550..4713
DNA (1164bp) protein (388aa)
putative branched chain amino acid ABC transporter substrate-binding protein Tax=GWA2_Rokubacteria_73_35_curated
Putative branched chain amino acid ABC transporter substrate-binding protein id=4254256 bin=GWC2_Methylomirabilis_70_24 species=Tistrella mobilis genus=Tistrella taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
putative branched chain amino acid ABC transporter substrate-binding protein
13_1_40cm_4_scaffold_13869_6
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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4720..5481
DNA (762bp) protein (254aa)
monosaccharide-transporting ATPase (EC:3.6.3.17)
ABC transporter-like protein; K01995 branched-chain amino acid transport system ATP-binding protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
ABC transporter related id=1703894 bin=GWA2_Methylomirabilis_73_35 species=Methylobacterium sp. genus=Methylobacterium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_4_scaffold_13869_7
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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5738..6187
DNA (450bp) protein (150aa)
LivF; ABC-type branched-chain amino acid transport systems, ATPase component; K01996 branched-chain amino acid transport system ATP-binding protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family id=3457489 bin=GWF2_Methylomirabilis_70_14 species=Thermaerobacter subterraneus genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ABC transporter
Displaying 7 items

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