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13_1_40cm_4_scaffold_14848

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_14848_1
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..878)
DNA (876bp) protein (292aa)
Amidohydrolase 2 n=1 Tax=Mycobacterium smegmatis MKD8 RepID=L8FKS4_MYCSM
Uncharacterized protein {ECO:0000313|EMBL:ETX02168.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
amidohydrolase
13_1_40cm_4_scaffold_14848_2
unknown

Not on your lists

comp(1065..1916)
DNA (852bp) protein (284aa)

This feature has no annotations

13_1_40cm_4_scaffold_14848_3
unknown

Not on your lists

comp(1935..2117)
DNA (183bp) protein (61aa)

This feature has no annotations

13_1_40cm_4_scaffold_14848_4
unknown

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comp(2167..2325)
DNA (159bp) protein (53aa)

This feature has no annotations

13_1_40cm_4_scaffold_14848_5
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2322..2990)
DNA (669bp) protein (223aa)
Uncharacterized protein n=1 Tax=Methylocystis sp. (strain SC2) RepID=J7QLN8_METSZ
hypothetical protein
Membrane protein {ECO:0000313|EMBL:KJC56803.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM
13_1_40cm_4_scaffold_14848_6
unknown

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3129..3353
DNA (225bp) protein (75aa)

This feature has no annotations

13_1_40cm_4_scaffold_14848_7
Legionella drancourtii, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3366..3695)
DNA (330bp) protein (110aa)
Alkyl hydroperoxide reductase AhpD {ECO:0000256|SAAS:SAAS00088523}; EC=1.11.1.15 {ECO:0000256|SAAS:SAAS00088503};; TaxID=658187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; L
hypothetical protein n=1 Tax=Actinomadura atramentaria RepID=UPI00037BBD82
protein of unknown function [AhpD domain]
13_1_40cm_4_scaffold_14848_8
RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3728..4585)
DNA (858bp) protein (286aa)
dienelactone hydrolase (EC:3.1.1.45); K01061 carboxymethylenebutenolidase [EC:3.1.1.45] Tax=RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated
Carboxymethylenebutenolidase (EC:3.1.1.45)
carboxymethylenebutenolidase n=1 Tax=Chlorogloeopsis RepID=UPI00035DE86D
13_1_40cm_4_scaffold_14848_9
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

4934..5641
DNA (708bp) protein (236aa)
Fis family transcriptionel regulator; K07712 two-component system, NtrC family, nitrogen regulation response regulator GlnG Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Two component, sigma54 specific, transcriptional regulator, Fis family id=5017004 bin=GWA2_Methylomirabilis_73_35 species=Thermobaculum terrenum genus=Thermobaculum taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
response regulator receiver modulated diguanylate cyclase
13_1_40cm_4_scaffold_14848_10
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5732..6490
DNA (759bp) protein (253aa)
short-chain alcohol dehydrogenase Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
Short-chain dehydrogenase id=2247805 bin=GWA2_Methylomirabilis_73_35 species=Oceanibaculum indicum genus=Oceanibaculum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
short-chain alcohol dehydrogenase
13_1_40cm_4_scaffold_14848_11
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6519..7535)
DNA (1017bp) protein (339aa)
Hydroxymethylglutaryl-CoA lyase n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1IJT1_9BRAD
Hydroxymethylglutaryl-CoA lyase {ECO:0000313|EMBL:ERF82804.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhiz
hypothetical protein
13_1_40cm_4_scaffold_14848_12
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7532..9253)
DNA (1722bp) protein (574aa)
hypothetical protein n=1 Tax=Thermus oshimai RepID=UPI00036B33BF
Alcohol dehydrogenase {ECO:0000313|EMBL:EWY40770.1}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibi
alcohol dehydrogenase
13_1_40cm_4_scaffold_14848_13
unknown

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comp(9384..9587)
DNA (204bp) protein (68aa)

This feature has no annotations

13_1_40cm_4_scaffold_14848_14
Methyloversatilis universalis, Methyloversatilis, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9917..11641)
DNA (1725bp) protein (575aa)
alcohol dehydrogenase n=1 Tax=Methyloversatilis universalis RepID=UPI000370308F
PQQ-dependent dehydrogenase {ECO:0000313|EMBL:EGK71006.1}; TaxID=1000565 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Methyloversatilis.;" source="Methyloversa
alcohol dehydrogenase
13_1_40cm_4_scaffold_14848_15
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(11653..12273)
DNA (621bp) protein (207aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. ORS 285 RepID=H0RT19_9BRAD
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
hypothetical protein
13_1_40cm_4_scaffold_14848_16
unknown

Not on your lists

12536..12739
DNA (204bp) protein (68aa)

This feature has no annotations

13_1_40cm_4_scaffold_14848_17
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

12801..13118
DNA (318bp) protein (106aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
Antibiotic biosynthesis monooxygenase domain-containing protein id=3139743 bin=GWF2_Methylomirabilis_70_14 species=Gordonia polyisoprenivorans genus=Gordonia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
oxidoreductase
13_1_40cm_4_scaffold_14848_18
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(13179..13499)
DNA (321bp) protein (107aa)
OmpA/MotB domain protein id=14626729 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
OmpA/MotB domain protein Tax=CSP1_6_Rokubacteria
peptidoglycan-associated lipoprotein
Displaying 18 items

View Taxonomy