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13_1_40cm_4_scaffold_15832

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_15832_1
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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1..1044
DNA (1044bp) protein (348aa)
L-sorbosone dehydrogenase n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZJM2_9BACT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
hypothetical protein
13_1_40cm_4_scaffold_15832_2
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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1068..1646
DNA (579bp) protein (193aa)
Cytochrome c, class I n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VRM9_POLNA
class I cytochrome c Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
class I cytochrome c
13_1_40cm_4_scaffold_15832_3
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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2937..4973
DNA (2037bp) protein (679aa)
molybdopterin-binding oxidoreductase Tax=GWA2_Rokubacteria_73_35_curated
Oxidoreductase, molybdopterin-binding protein id=2306498 bin=GWA2_Methylomirabilis_73_35 species=alpha proteobacterium BAL199 genus=unknown taxon_order=unknown taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
oxidoreductase, molybdopterin-binding protein
13_1_40cm_4_scaffold_15832_4
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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4970..5551
DNA (582bp) protein (194aa)
Putative uncharacterized protein id=2306497 bin=GWA2_Methylomirabilis_73_35 species=alpha proteobacterium BAL199 genus=unknown taxon_order=unknown taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Putative uncharacterized protein Tax=GWA2_Rokubacteria_73_35_curated
13_1_40cm_4_scaffold_15832_5
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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5668..6687
DNA (1020bp) protein (340aa)
Beta-lactamase-like protein n=1 Tax=Magnetospirillum sp. SO-1 RepID=M2ZTK9_9PROT
beta-lactamase domain-containing protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
metallo-beta-lactamase superfamily protein
13_1_40cm_4_scaffold_15832_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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comp(6726..7901)
DNA (1176bp) protein (392aa)
murB; UDP-N-acetylmuramate dehydrogenase (EC:1.1.1.158); K00075 UDP-N-acetylmuramate dehydrogenase [EC:1.1.1.158] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
murB; UDP-N-acetylmuramate dehydrogenase (EC:1.1.1.158)
UDP-N-acetylenolpyruvoylglucosamine reductase id=4793438 bin=GWA2_Methylomirabilis_73_35 species=Sorangium cellulosum genus=Sorangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_4_scaffold_15832_7
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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comp(7909..8637)
DNA (729bp) protein (243aa)
Sigma-54 factor interaction domain-containing protein id=2883274 bin=GWA2_Methylomirabilis_73_35 species=Desulfovibrio aespoeensis genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
sigma-54 factor interaction domain-containing protein; K13599 two-component system, NtrC family, nitrogen regulation response regulator NtrX Tax=GWA2_Rokubacteria_73_35_curated
atoC12; sigma-54 dependent DNA-binding response regulator
13_1_40cm_4_scaffold_15832_8
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(8634..9533)
DNA (900bp) protein (300aa)
3-hydroxyisobutyrate dehydrogenase (EC:1.1.1.31)
tartronate semialdehyde reductase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
3-hydroxyisobutyrate dehydrogenase id=2883270 bin=GWA2_Methylomirabilis_73_35 species=Paenibacillus curdlanolyticus genus=Paenibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Displaying 8 items

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