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13_1_40cm_4_scaffold_1677

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Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_1677_1
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

3..887
DNA (885bp) protein (295aa)
Putative uncharacterized protein id=2773068 bin=GWA2_Methylomirabilis_73_35 species=Planctomyces maris genus=Planctomyces taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
dihydroorotate dehydrogenase Tax=GWA2_Rokubacteria_73_35_curated
dihydroorotate dehydrogenase
13_1_40cm_4_scaffold_1677_2
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(1032..1793)
DNA (762bp) protein (254aa)
ABC transporter-like protein; K02049 NitT/TauT family transport system ATP-binding protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
ABC transporter-like protein id=2817364 bin=GWC2_Methylomirabilis_70_16 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
ABC transporter
13_1_40cm_4_scaffold_1677_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(1790..2797)
DNA (1008bp) protein (336aa)
membrane lipoprotein lipid attachment site; K02051 NitT/TauT family transport system substrate-binding protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Membrane lipoprotein lipid attachment site id=2817368 bin=GWC2_Methylomirabilis_70_16 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
ABC transporter substrate-binding protein
13_1_40cm_4_scaffold_1677_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(2808..3527)
DNA (720bp) protein (240aa)
hypothetical protein; K02050 NitT/TauT family transport system permease protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Abc transporter permease protein id=2817372 bin=GWC2_Methylomirabilis_70_16 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
13_1_40cm_4_scaffold_1677_5
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

3576..4604
DNA (1029bp) protein (343aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Putative uncharacterized protein id=4165887 bin=GWF2_Methylomirabilis_70_14 species=Nitrospina gracilis genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
CgeB family protein
13_1_40cm_4_scaffold_1677_6
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

4601..5827
DNA (1227bp) protein (409aa)
threonine synthase; K01733 threonine synthase [EC:4.2.3.1] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
threonine synthase; K01733 threonine synthase [EC:4.2.3.1] id=14626721 bin=bin7_NC10_sister species=Frankia sp. QA3 genus=Frankia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin7_NC10_sister organism_group=NC10
threonine synthase
13_1_40cm_4_scaffold_1677_7
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

5842..6516
DNA (675bp) protein (225aa)
DNA-3-methyladenine glycosylase; K03652 DNA-3-methyladenine glycosylase [EC:3.2.2.21] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Putative 3-methyladenine DNA glycosylase id=2773084 bin=GWA2_Methylomirabilis_73_35 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
DNA-3-methyladenine glycosylase
13_1_40cm_4_scaffold_1677_8
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(6586..7359)
DNA (774bp) protein (258aa)
beta-lactamase domain-containing protein; K00784 ribonuclease Z [EC:3.1.26.11] Tax=GWA2_Rokubacteria_73_35_curated
Beta-lactamase domain protein id=4489512 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
beta-lactamase domain-containing protein
13_1_40cm_4_scaffold_1677_9
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(7356..8123)
DNA (768bp) protein (256aa)
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
hypothetical protein id=2773093 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_4_scaffold_1677_10
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

8178..8888
DNA (711bp) protein (237aa)
tolQ; TolQ protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
tolQ protein; K03562 biopolymer transport protein TolQ id=14626725 bin=bin7_NC10_sister species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
tolQ; TolQ protein
13_1_40cm_4_scaffold_1677_11
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

8891..9319
DNA (429bp) protein (143aa)
tolR; protein TolR; K03560 biopolymer transport protein TolR Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
tolR; protein TolR; K03560 biopolymer transport protein TolR id=14626726 bin=bin7_NC10_sister species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=bin7_NC10_sister organism_group=NC10
tolR; protein TolR
13_1_40cm_4_scaffold_1677_12
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

9341..10177
DNA (837bp) protein (279aa)
putative periplasmic protein TonB; K03832 periplasmic protein TonB Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
TonB family protein id=4034141 bin=GWA2_Methylomirabilis_73_35 species=Synechococcus sp. genus=Synechococcus taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
putative periplasmic protein TonB
13_1_40cm_4_scaffold_1677_13
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

10182..11513
DNA (1332bp) protein (444aa)
tolB protein; K03641 TolB protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
WD40 domain-containing protein; K03641 TolB protein id=14626728 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
biopolymer transport TolB-like protein
13_1_40cm_4_scaffold_1677_14
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

11561..12166
DNA (606bp) protein (202aa)
OmpA/MotB domain protein id=4034147 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
OmpA/MotB domain protein Tax=GWC2_Rokubacteria_70_16_curated
peptidoglycan-binding outer membrane lipoprotein Pal, OmpA family
13_1_40cm_4_scaffold_1677_15
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

12184..13062
DNA (879bp) protein (293aa)
Tol-Pal system YbgF id=14626730 bin=bin7_NC10_sister species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=bin7_NC10_sister organism_group=NC10
Tol-Pal system YbgF Tax=CSP1_6_Rokubacteria
hypothetical protein
13_1_40cm_4_scaffold_1677_16
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(13075..13563)
DNA (489bp) protein (163aa)
hypothetical protein id=4034151 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
13_1_40cm_4_scaffold_1677_17
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

13608..14249
DNA (642bp) protein (214aa)
hypothetical protein; K07018 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
Alpha/beta hydrolase family protein id=4034153 bin=GWA2_Methylomirabilis_73_35 species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
alpha/beta hydrolase family protein
13_1_40cm_4_scaffold_1677_18
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(14283..14933)
DNA (651bp) protein (217aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative uncharacterized protein id=4165954 bin=GWF2_Methylomirabilis_70_14 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_40cm_4_scaffold_1677_19
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

14950..15621
DNA (672bp) protein (224aa)
oxidoreductase, short chain dehydrogenase/reductase family Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Short-chain dehydrogenase/reductase SDR id=4034156 bin=GWA2_Methylomirabilis_73_35 species=Roseiflexus castenholzii genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
putative oxidoreductase
13_1_40cm_4_scaffold_1677_20
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(15628..16335)
DNA (708bp) protein (236aa)
Beta-lactamase-like Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Beta-lactamase-like id=4034158 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Beta-lactamase-like
13_1_40cm_4_scaffold_1677_21
R_Rokubacteria_69_13, Rokubacteria, Bacteria

Not on your lists

16405..17370
DNA (966bp) protein (322aa)
hypothetical protein n=1 Tax=Salinispora pacifica RepID=UPI00037B3800
hypothetical protein Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
hypothetical protein
13_1_40cm_4_scaffold_1677_22
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

17390..18193
DNA (804bp) protein (268aa)
hypothetical protein id=4034163 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
13_1_40cm_4_scaffold_1677_23
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(18190..19956)
DNA (1767bp) protein (589aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Uncharacterized protein id=4034165 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_40cm_4_scaffold_1677_24
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(19963..21489)
DNA (1527bp) protein (509aa)
gliding motility ABC transporter auxillary protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative ABC-type uncharacterized transport system involved in gliding motility auxiliary component-like id=4034167 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
gliding motility ABC transporter auxillary protein
13_1_40cm_4_scaffold_1677_25
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(21486..22184)
DNA (699bp) protein (233aa)
multi-copper enzyme maturation ABC transporter permease Tax=GWA2_Rokubacteria_73_35_curated
multi-copper enzyme maturation ABC transporter permease id=14626740 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
multi-copper enzyme maturation ABC transporter permease
13_1_40cm_4_scaffold_1677_26
R_Rokubacteria_69_13, Rokubacteria, Bacteria

Not on your lists

23004..23126
DNA (123bp) protein (41aa)
Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
13_1_40cm_4_scaffold_1677_27
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(23493..23894)
DNA (402bp) protein (134aa)
thioesterase superfamily protein; K07107 acyl-CoA thioester hydrolase [EC:3.1.2.-] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Putative uncharacterized protein id=4830683 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
4-hydroxybenzoyl-CoA thioesterase
13_1_40cm_4_scaffold_1677_28
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(23900..24085)
DNA (186bp) protein (62aa)
26S proteasome subunit P45 family (EC:3.6.4.3) Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Proteasome-activating nucleotidase id=4165965 bin=GWF2_Methylomirabilis_70_14 species=Thermosphaera aggregans genus=Thermosphaera taxon_order=Desulfurococcales taxon_class=Thermoprotei phylum=Crenarchaeota tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_4_scaffold_1677_29
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(24803..25342)
DNA (540bp) protein (180aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative uncharacterized protein id=5020386 bin=GWA2_Methylomirabilis_73_35 species=Desulfonatronospira thiodismutans genus=Desulfonatronospira taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_40cm_4_scaffold_1677_30
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(25528..26070)
DNA (543bp) protein (181aa)
transport protein, belonging to the Major Facilitator Superfamily, of which narK is a member Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
transport protein, belonging to the Major Facilitator Superfamily, of which narK is a member id=14626746 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
transport protein, belonging to the Major Facilitator Superfamily, of which narK is a member
Displaying items 1-30 of 31 in total

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