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13_1_40cm_4_scaffold_17626

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_17626_1
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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comp(3..896)
DNA (894bp) protein (298aa)
peptide chain release factor 1; K02835 peptide chain release factor 1 Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Peptide chain release factor 1 id=4980433 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
prfA; peptide chain release factor 1
13_1_40cm_4_scaffold_17626_2
R_Rokubacteria_71_18, Rokubacteria, Bacteria

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comp(963..1175)
DNA (213bp) protein (71aa)
LSU ribosomal protein L31P Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
50S ribosomal protein L31 id=14625930 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
LSU ribosomal protein L31P
13_1_40cm_4_scaffold_17626_3
R_Rokubacteria_71_18, Rokubacteria, Bacteria

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comp(1259..2572)
DNA (1314bp) protein (438aa)
rho; transcription termination factor Rho; K03628 transcription termination factor Rho Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
rho; transcription termination factor Rho id=14625929 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=bin7_NC10_sister organism_group=NC10
transcription termination factor Rho
13_1_40cm_4_scaffold_17626_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(2710..3792)
DNA (1083bp) protein (361aa)
PpiC-type peptidyl-prolyl cis-trans isomerase; K03771 peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PpiC-type peptidyl-prolyl cis-trans isomerase id=4980430 bin=GWA2_Methylomirabilis_73_35 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
PpiC-type peptidyl-prolyl cis-trans isomerase
13_1_40cm_4_scaffold_17626_5
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

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4296..7796
DNA (3501bp) protein (1167aa)
Putative Transcription-repair-coupling factor n=1 Tax=Streptomyces afghaniensis 772 RepID=S4N1S4_9ACTO
Uncharacterized protein Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
13_1_40cm_4_scaffold_17626_6
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(7750..8082)
DNA (333bp) protein (111aa)
ATP synthase subunit C, membrane-bound, F0 sector; DCCD-binding (EC:3.6.3.14) Tax=GWA2_Rokubacteria_70_23_curated
ATP synthase subunit C, membrane-bound, F0 sector DCCD-binding (Modular protein) id=4246292 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
ATP synthase f0 subcomplex c subunit
13_1_40cm_4_scaffold_17626_7
R_Rokubacteria_69_13, Rokubacteria, Bacteria

Not on your lists

comp(8110..8865)
DNA (756bp) protein (252aa)
ATP synthase subunit A (EC:3.6.3.14) Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
ATP synthase subunit A (EC:3.6.3.14) id=14625924 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
ATP synthase subunit A (EC:3.6.3.14)
13_1_40cm_4_scaffold_17626_8
unknown

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comp(8868..9152)
DNA (285bp) protein (95aa)

This feature has no annotations

Displaying 8 items

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