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13_1_40cm_4_scaffold_20384

Search features with annotation key words

Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_20384_1
Meiothermus ruber, Meiothermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

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2..115
DNA (114bp) protein (38aa)
Uncharacterized protein n=1 Tax=Meiothermus ruber (strain ATCC 35948 / DSM 1279 / VKM B-1258 / 21) RepID=M9XEC1_MEIRD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGK05289.1}; TaxID=504728 species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Meiothermus.;" source="Meiothermus ruber (strain ATCC 359
13_1_40cm_4_scaffold_20384_2
Pseudomonas sp. GM102, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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112..600
DNA (489bp) protein (163aa)
Uncharacterized protein n=1 Tax=Pseudomonas sp. GM102 RepID=J3E8P2_9PSED
Uncharacterized protein {ECO:0000313|EMBL:EJM07345.1}; TaxID=1144321 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. G
hypothetical protein
13_1_40cm_4_scaffold_20384_3
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria

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comp(591..1760)
DNA (1170bp) protein (390aa)
Putative TIM-barrel fold metal-dependent hydrolase n=1 Tax=Microcoleus sp. PCC 7113 RepID=K9W9J9_9CYAN
TIM-barrel fold metal-dependent hydrolase Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
TIM-barrel fold metal-dependent hydrolase
13_1_40cm_4_scaffold_20384_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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comp(1783..2877)
DNA (1095bp) protein (365aa)
alcohol dehydrogenase class III; K00121 S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Alcohol dehydrogenase class III id=3548794 bin=GWF2_Methylomirabilis_70_14 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
alcohol dehydrogenase class III
13_1_40cm_4_scaffold_20384_5
Caldatribacterium californiense, Caldatribacterium, Atribacteria, Bacteria

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3071..3976
DNA (906bp) protein (302aa)
hypothetical protein n=1 Tax=candidate division OP9 bacterium OP9-cSCG RepID=UPI00037F4586
sugar ABC transporter permease; K02025 multiple sugar transport system permease protein Tax=Caldatribacterium californiense
binding--dependent transport system inner membrane component family protein
13_1_40cm_4_scaffold_20384_6

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3973..4857
DNA (885bp) protein (295aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TNU7_MESCW
Marine sediment metagenome DNA, contig: S01H4_C02701 {ECO:0000313|EMBL:GAG66460.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
ABC transporter permease
13_1_40cm_4_scaffold_20384_7

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4873..6339
DNA (1467bp) protein (489aa)
hypothetical protein n=1 Tax=candidate division OP9 bacterium OP9-cSCG RepID=UPI0003766284
Marine sediment metagenome DNA, contig: S03H2_C01213 {ECO:0000313|EMBL:GAH30185.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
extracellular solute-binding protein
13_1_40cm_4_scaffold_20384_8
Geobacter metallireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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6377..6835
DNA (459bp) protein (153aa)
Histidine triad (HIT) family hydrolase n=2 Tax=Geobacter metallireducens RepID=Q39RB6_GEOMG
histidine triad (HIT) family hydrolase
Histidine triad (HIT) family hydrolase {ECO:0000313|EMBL:ABB33208.1}; TaxID=269799 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geob
13_1_40cm_4_scaffold_20384_9
Magnetospirillum magnetotacticum, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6857..8227)
DNA (1371bp) protein (457aa)
hypothetical protein n=1 Tax=Verrucomicrobium sp. 3C RepID=UPI00036074FB
Acid phosphatase {ECO:0000313|EMBL:KIL98063.1}; TaxID=272627 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum m
acid phosphatase
13_1_40cm_4_scaffold_20384_10
unknown

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comp(8246..8395)
DNA (150bp) protein (50aa)

This feature has no annotations

Displaying 10 items

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