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13_1_40cm_4_scaffold_23188

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_23188_1
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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comp(1..387)
DNA (387bp) protein (129aa)
Dehydrogenase (Modular protein) id=3428787 bin=GWC2_Methylomirabilis_70_16 species=Streptomyces cattleya genus=Streptomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Dehydrogenase Tax=GWC2_Rokubacteria_70_16_curated
putative short chain dehydrogenase
13_1_40cm_4_scaffold_23188_2
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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comp(398..1336)
DNA (939bp) protein (313aa)
hypothetical protein n=1 Tax=alpha proteobacterium SCGC AAA536-G10 RepID=UPI000368870D
cyclase Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
putative cyclase
13_1_40cm_4_scaffold_23188_3
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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comp(1352..2239)
DNA (888bp) protein (296aa)
rluD_3; ribosomal large subunit pseudouridine synthase D; K06180 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] Tax=GWA2_Rokubacteria_73_35_curated
RNA pseudouridylate synthase id=1890952 bin=GWA2_Methylomirabilis_73_35 species=Gemmata obscuriglobus genus=Gemmata taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
pseudouridine synthase
13_1_40cm_4_scaffold_23188_4
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(2194..2574)
DNA (381bp) protein (127aa)
id=4485920 Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
id=3068362 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
13_1_40cm_4_scaffold_23188_5
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

2718..3308
DNA (591bp) protein (197aa)
Uncharacterized protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YCQ8_NITMU
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
hypothetical protein
13_1_40cm_4_scaffold_23188_6
Chthonomonas calidirosea, Chthonomonas, Chthonomonadales, Chthonomonadetes, Armatimonadetes, Bacteria

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comp(3332..4042)
DNA (711bp) protein (237aa)
Pyrroloquinoline quinone (Coenzyme PQQ) biosynthesis protein C (EC:1.3.3.11)
Pyrroloquinoline quinone (Coenzyme PQQ) biosynthesis protein C {ECO:0000313|EMBL:CCW35737.1}; EC=1.3.3.11 {ECO:0000313|EMBL:CCW35737.1};; TaxID=1303518 species="Bacteria; Armatimonadetes; Chthonomonad
Pyrroloquinoline quinone (Coenzyme PQQ) biosynthesis protein C n=1 Tax=Chthonomonas calidirosea T49 RepID=S0EZE9_9BACT
13_1_40cm_4_scaffold_23188_7
Marinithermus hydrothermalis, Marinithermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

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comp(4104..5546)
DNA (1443bp) protein (481aa)
amidase (EC:3.5.1.4)
Amidase {ECO:0000313|EMBL:AEB11001.1}; EC=3.5.1.4 {ECO:0000313|EMBL:AEB11001.1};; TaxID=869210 species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Marinithermus.;" source="Marin
Amidase n=1 Tax=Marinithermus hydrothermalis (strain DSM 14884 / JCM 11576 / T1) RepID=F2NNI6_MARHT
13_1_40cm_4_scaffold_23188_8
R_Deltaproteobacteria_44_9, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(5553..7145)
DNA (1593bp) protein (531aa)
acetolactate synthase large subunit (EC:2.2.1.6) Tax=RIFCSPLOWO2_02_Deltaproteobacteria_44_9_curated
Thiamine pyrophosphate-dependent enzyme, possible carboligase or decarboxylase n=1 Tax=Microcoleus sp. PCC 7113 RepID=K9WG09_9CYAN
thiamine pyrophosphate-dependent protein
13_1_40cm_4_scaffold_23188_9
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

7380..7811
DNA (432bp) protein (144aa)
UspA domain-containing protein id=3995090 bin=GWA2_Methylomirabilis_73_35 species=Verrucomicrobium spinosum genus=Verrucomicrobium taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
UspA domain-containing protein Tax=GWA2_Rokubacteria_73_35_curated
13_1_40cm_4_scaffold_23188_10
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

7942..9600
DNA (1659bp) protein (553aa)
Hemin-binding lipoprotein id=3677748 bin=GWF2_Methylomirabilis_70_14 species=unknown genus=unknown taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
dipeptide ABC transporter substrate-binding protein Tax=GWA2_Rokubacteria_70_23_curated
dipeptide ABC transporter substrate-binding protein
Displaying 10 items

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