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13_1_40cm_4_scaffold_2519

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_2519_1
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

2..1303
DNA (1302bp) protein (434aa)
Mg chelatase subunit ChlI; K07391 magnesium chelatase family protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
transcriptional regulator id=14625658 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
Mg chelatase subunit ChlI
13_1_40cm_4_scaffold_2519_2
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

1345..1881
DNA (537bp) protein (179aa)
isochorismatase hydrolase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
Isochorismatase hydrolase id=3268091 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Methylotenera taxon_order=Methylophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hydrolase
13_1_40cm_4_scaffold_2519_3
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

1918..2061
DNA (144bp) protein (48aa)
hypothetical protein Tax=GWC2_Rokubacteria_70_16_curated
13_1_40cm_4_scaffold_2519_4
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(2062..2646)
DNA (585bp) protein (195aa)
Lytic transglycosylase, catalytic id=3544309 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Lytic transglycosylase, catalytic Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Lytic transglycosylase, catalytic
13_1_40cm_4_scaffold_2519_5
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(2798..5191)
DNA (2394bp) protein (798aa)
ATP-dependent proteinase. Serine peptidase. MEROPS family S16 (EC:3.4.21.53) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
ATP-dependent proteinase. Serine peptidase. MEROPS family S16 (EC:3.4.21.53) id=14625663 bin=bin7_NC10_sister species=Chthonomonas calidirosea genus=Chthonomonas taxon_order=Chthonomonadales taxon_class=Chthonomonadetes phylum=Armatimonadetes tax=bin7_NC10_sister organism_group=NC10
ATP-dependent proteinase. Serine peptidase. MEROPS family S16 (EC:3.4.21.53)
13_1_40cm_4_scaffold_2519_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(5219..5605)
DNA (387bp) protein (129aa)
transcriptional regulator; K13640 MerR family transcriptional regulator, heat shock protein HspR Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Transcriptional regulator id=3544313 bin=GWA2_Methylomirabilis_73_35 species=Hydrogenivirga sp. 128-5-R1-1 genus=Hydrogenivirga taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
transcriptional regulator
13_1_40cm_4_scaffold_2519_7
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(5602..6063)
DNA (462bp) protein (154aa)
Zn finger domain-containing DnaJ-class molecular chaperone; K03686 molecular chaperone DnaJ Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
DnaJ-class molecular chaperone with C-terminal Zn finger domain id=3544317 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Chloracidobacterium thermophilum genus=Candidatus Chloracidobacterium taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
dnaJ; chaperone protein dnaJ, heat shock protein (Hsp40), co-chaperone with dnaK
13_1_40cm_4_scaffold_2519_8
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(6012..6434)
DNA (423bp) protein (141aa)
DnaJ-class molecular chaperone with C-terminal Zn finger domain id=3544317 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Chloracidobacterium thermophilum genus=Candidatus Chloracidobacterium taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Zn finger domain-containing DnaJ-class molecular chaperone; K03686 molecular chaperone DnaJ Tax=GWA2_Rokubacteria_73_35_curated
chaperone protein dnaJ
13_1_40cm_4_scaffold_2519_9
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(6441..8357)
DNA (1917bp) protein (639aa)
dnaK; chaperone protein dnaK (Heat shock protein 70) (Heat shock 70 kDa protein) (HSP70) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
dnaK; chaperone protein dnaK (Heat shock protein 70) (Heat shock 70 kDa protein) (HSP70) id=14625666 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
dnaK; chaperone protein dnaK (Heat shock protein 70) (Heat shock 70 kDa protein) (HSP70)
13_1_40cm_4_scaffold_2519_10
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(8430..8900)
DNA (471bp) protein (157aa)
Heat shock protein Hsp20 Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Heat shock protein Hsp20 id=4311462 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Heat shock protein Hsp20
13_1_40cm_4_scaffold_2519_11
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

9200..9724
DNA (525bp) protein (175aa)
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
hypothetical protein id=4311463 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_4_scaffold_2519_12
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(9681..10097)
DNA (417bp) protein (139aa)
Putative uncharacterized protein id=4311464 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein
13_1_40cm_4_scaffold_2519_13
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

10160..10969
DNA (810bp) protein (270aa)
protein mazG Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
Protein mazG id=4311465 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
protein mazG
13_1_40cm_4_scaffold_2519_14
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

10966..11502
DNA (537bp) protein (179aa)
Predicted phosphatase id=4311466 bin=GWA2_Methylomirabilis_73_35 species=Pelotomaculum thermopropionicum genus=Pelotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
phosphatase Tax=GWA2_Rokubacteria_73_35_curated
phosphatase
13_1_40cm_4_scaffold_2519_15
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

11509..13251
DNA (1743bp) protein (581aa)
type II secretion system protein E; K02652 type IV pilus assembly protein PilB Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Type IV-A pilus assembly ATPase PilB id=3773045 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
type IV-A pilus assembly ATPase PilB
13_1_40cm_4_scaffold_2519_16
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

13283..14404
DNA (1122bp) protein (374aa)
twitching motility protein; K02669 twitching motility protein PilT Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Twitching motility protein id=3773050 bin=GWC2_Methylomirabilis_70_16 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
twitching motility protein
13_1_40cm_4_scaffold_2519_17
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

14923..15021
DNA (99bp) protein (33aa)
pilC; type 4 fimbrial assembly protein pilC Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Displaying 17 items

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