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13_1_40cm_4_scaffold_27173

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_27173_1
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(3..680)
DNA (678bp) protein (226aa)
alpha/beta hydrolase fold protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
Alpha/beta hydrolase fold id=3564582 bin=GWA2_Methylomirabilis_73_35 species=Burkholderia cenocepacia genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
alpha/beta hydrolase
13_1_40cm_4_scaffold_27173_2
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

750..2183
DNA (1434bp) protein (478aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative uncharacterized protein id=4493806 bin=GWC2_Methylomirabilis_70_16 species=Azoarcus sp. KH32C genus=Azoarcus taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
13_1_40cm_4_scaffold_27173_3
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

2180..3136
DNA (957bp) protein (319aa)
putative xylanase/chitin deacetylase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
Putative xylanase/chitin deacetylase id=3837102 bin=GWC2_Methylomirabilis_70_24 species=Solitalea canadensis genus=Solitalea taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
polysaccharide deacetylase
13_1_40cm_4_scaffold_27173_4
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(3244..5001)
DNA (1758bp) protein (586aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Uncharacterized conserved protein UCP016719 id=3564591 bin=GWA2_Methylomirabilis_73_35 species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_40cm_4_scaffold_27173_5
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

5566..6465
DNA (900bp) protein (300aa)
NAD-dependent epimerase/dehydratase; K00329 NADH dehydrogenase [EC:1.6.5.3]; K00356 NADH dehydrogenase [EC:1.6.99.3] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
NAD-dependent epimerase/dehydratase id=4956249 bin=GWC2_Methylomirabilis_70_16 species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
NAD-dependent dehydratase
13_1_40cm_4_scaffold_27173_6
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

6465..6932
DNA (468bp) protein (156aa)
id=4956250 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
id=4956250 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
13_1_40cm_4_scaffold_27173_7
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(6882..7172)
DNA (291bp) protein (97aa)
hypothetical protein id=3564597 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
13_1_40cm_4_scaffold_27173_8
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

7206..8375
DNA (1170bp) protein (390aa)
major facilitator transporter Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
major facilitator transporter id=14626825 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin7_NC10_sister organism_group=NC10
major facilitator transporter
Displaying 8 items

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