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13_1_40cm_4_scaffold_3551

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_3551_1
unknown

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comp(1..681)
DNA (681bp) protein (227aa)

This feature has no annotations

13_1_40cm_4_scaffold_3551_2
Actinoplanes utahensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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comp(654..1580)
DNA (927bp) protein (309aa)
hypothetical protein n=1 Tax=Terracoccus sp. 273MFTsu3.1 RepID=UPI0003827BAE
Xylose isomerase {ECO:0000313|EMBL:KHD73471.1}; TaxID=1869 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes utahensis.;"
hypothetical protein
13_1_40cm_4_scaffold_3551_3
Natrialba aegyptia, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(1577..2455)
DNA (879bp) protein (293aa)
UbiA prenyltransferase n=1 Tax=Natrialba aegyptia DSM 13077 RepID=M0AZ56_9EURY
UbiA prenyltransferase {ECO:0000313|EMBL:ELZ03805.1}; TaxID=1227491 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba aegyptia DSM 13077.;"
UbiA prenyltransferase
13_1_40cm_4_scaffold_3551_4
Streptomyces sp. Tu6071, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(2431..3600)
DNA (1170bp) protein (390aa)
myo-inositol-1-phosphate synthase n=1 Tax=Streptomyces RepID=UPI0001FFF832
Putative secreted protein {ECO:0000313|EMBL:EGJ77619.1}; TaxID=355249 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. Tu6071.;"
myo-inositol-1-phosphate synthase
13_1_40cm_4_scaffold_3551_5
Natrinema gari, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(3736..4461)
DNA (726bp) protein (242aa)
5-formyltetrahydrofolate cyclo-ligase n=2 Tax=Natrinema RepID=I7CYM9_NATSJ
5-formyltetrahydrofolate cyclo-ligase
5-formyltetrahydrofolate cyclo-ligase {ECO:0000313|EMBL:ELY79927.1}; TaxID=1230459 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema gari JCM 1
13_1_40cm_4_scaffold_3551_6
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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comp(4448..6181)
DNA (1734bp) protein (578aa)
PHP C-terminal domain protein id=4426899 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
phP C-terminal domain-containing protein Tax=GWC2_Rokubacteria_70_16_curated
phP C-terminal domain-containing protein
13_1_40cm_4_scaffold_3551_7
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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6207..6575
DNA (369bp) protein (123aa)
Putative uncharacterized protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative uncharacterized protein id=4379979 bin=GWA2_Methylomirabilis_73_35 species=Nitrospina gracilis genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_4_scaffold_3551_8
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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6599..6781
DNA (183bp) protein (61aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein id=4379977 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_4_scaffold_3551_9
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

6778..7590
DNA (813bp) protein (271aa)
periplasmic binding protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Periplasmic binding protein id=4379975 bin=GWA2_Methylomirabilis_73_35 species=Rubrobacter xylanophilus genus=Rubrobacter taxon_order=Rubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
periplasmic binding protein
13_1_40cm_4_scaffold_3551_10
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(7594..7746)
DNA (153bp) protein (51aa)
hypothetical protein id=4379973 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
13_1_40cm_4_scaffold_3551_11
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(7743..8849)
DNA (1107bp) protein (369aa)
putative two-component hybrid sensor and regulator Tax=GWC2_Rokubacteria_70_16_curated
Putative two-component hybrid sensor and regulator id=4232695 bin=GWC2_Methylomirabilis_70_16 species=Azospirillum brasilense genus=Azospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
multi-sensor hybrid histidine kinase
13_1_40cm_4_scaffold_3551_12
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(9002..9466)
DNA (465bp) protein (155aa)
Endoribonuclease L-PSP id=4379943 bin=GWA2_Methylomirabilis_73_35 species=Flavobacteria bacterium MS024-2A genus=unknown taxon_order=unknown taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
transcription regulator Tax=GWA2_Rokubacteria_73_35_curated
endoribonuclease L-PSP
13_1_40cm_4_scaffold_3551_13
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

9510..10124
DNA (615bp) protein (205aa)
NUDIX hydrolase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
NTP pyrophosphohydrolases including oxidative damage repair enzymes id=4379942 bin=GWA2_Methylomirabilis_73_35 species=uncultured gamma proteobacterium HF4000_19M20 genus=unknown taxon_order=unknown taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
NUDIX hydrolase
Displaying 13 items

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