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13_1_40cm_4_scaffold_4071

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_4071_1
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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2..211
DNA (210bp) protein (70aa)
phosphoribosylformylglycinamidine synthase I; K01952 phosphoribosylformylglycinamidine synthase [EC:6.3.5.3] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
purQ; phosphoribosylformylglycinamidine synthase subunit PurQ (EC:6.3.5.3)
Phosphoribosylformylglycinamidine synthase 1 id=4153835 bin=GWC2_Methylomirabilis_70_16 species=Moorella thermoacetica genus=Moorella taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
13_1_40cm_4_scaffold_4071_2
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

218..2440
DNA (2223bp) protein (741aa)
phosphoribosylformylglycinamidine synthase II (EC:6.3.5.3); K01952 phosphoribosylformylglycinamidine synthase [EC:6.3.5.3] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
phosphoribosylformylglycinamidine synthase II (EC:6.3.5.3); K01952 phosphoribosylformylglycinamidine synthase [EC:6.3.5.3] id=14625427 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=bin7_NC10_sister organism_group=NC10
phosphoribosylformylglycinamidine synthase II (EC:6.3.5.3)
13_1_40cm_4_scaffold_4071_3
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

2421..3836
DNA (1416bp) protein (472aa)
purF; amidophosphoribosyltransferase (Glutamine phosphoribosylpyrophosphate amidotransferase) (ATASE) (GPATase) (EC:2.4.2.14) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
purF; amidophosphoribosyltransferase (Glutamine phosphoribosylpyrophosphate amidotransferase) (ATASE) (GPATase) (EC:2.4.2.14) id=14625428 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
purF; amidophosphoribosyltransferase (Glutamine phosphoribosylpyrophosphate amidotransferase) (ATASE) (GPATase) (EC:2.4.2.14)
13_1_40cm_4_scaffold_4071_4
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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3857..4888
DNA (1032bp) protein (344aa)
PurM; phosphoribosylaminoimidazole synthetase; K01933 phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1] Tax=GWA2_Rokubacteria_73_35_curated
phosphoribosylformylglycinamidine cyclo-ligase (EC:6.3.3.1)
Phosphoribosylformylglycinamidine cyclo-ligase id=1817203 bin=GWA2_Methylomirabilis_73_35 species=Pelotomaculum thermopropionicum genus=Pelotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_4_scaffold_4071_5
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

4885..5553
DNA (669bp) protein (223aa)
phosphoribosylglycinamide formyltransferase; K11175 phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] Tax=GWA2_Rokubacteria_73_35_curated
phosphoribosylglycinamide formyltransferase (EC:2.1.2.2)
Phosphoribosylglycinamide formyltransferase, folate-dependent id=4153845 bin=GWC2_Methylomirabilis_70_16 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
13_1_40cm_4_scaffold_4071_6
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

6771..7094
DNA (324bp) protein (108aa)
purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase (EC:2.1.2.3 3.5.4.10); K00602 phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydro
purH; purine biosynthesis protein purH (EC:2.1.2.3 3.5.4.10)
Bifunctional purine biosynthesis protein PurH id=3389040 bin=GWC2_Methylomirabilis_70_24 species=unknown genus=Magnetococcus taxon_order=Magnetococcales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
13_1_40cm_4_scaffold_4071_7
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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7109..8128
DNA (1020bp) protein (340aa)
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
Tetratricopeptide TPR_2 repeat protein id=3389043 bin=GWC2_Methylomirabilis_70_24 species=Candidatus Solibacter usitatus genus=Candidatus Solibacter taxon_order=Solibacterales taxon_class=Solibacteres phylum=Acidobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein
13_1_40cm_4_scaffold_4071_8
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

8211..9479
DNA (1269bp) protein (423aa)
phosphoribosylamine--glycine ligase (EC:6.3.4.13); K01945 phosphoribosylamine--glycine ligase [EC:6.3.4.13] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
phosphoribosylamine--glycine ligase (EC:6.3.4.13)
Phosphoribosylamine--glycine ligase id=3389045 bin=GWC2_Methylomirabilis_70_24 species=alpha proteobacterium BAL199 genus=unknown taxon_order=unknown taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
13_1_40cm_4_scaffold_4071_9
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

9476..10000
DNA (525bp) protein (175aa)
hypothetical protein; K01588 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
phosphoribosylaminoimidazole carboxylase catalytic subunit (EC:4.1.1.21)
N5-carboxyaminoimidazole ribonucleotide mutase n=1 Tax=Ammonifex degensii (strain DSM 10501 / KC4) RepID=C9RB42_AMMDK
13_1_40cm_4_scaffold_4071_10
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

10039..10614
DNA (576bp) protein (192aa)
translation factor; K07566 tRNA threonylcarbamoyladenosine biosynthesis protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Putative translation factor id=4621962 bin=GWA2_Methylomirabilis_73_35 species=Symbiobacterium thermophilum genus=Symbiobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
translation factor
13_1_40cm_4_scaffold_4071_11
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

10664..11221
DNA (558bp) protein (186aa)
molybdopterin-guanine dinucleotide biosynthesis protein A Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
Molybdenum cofactor guanylyltransferase id=4621961 bin=GWA2_Methylomirabilis_73_35 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
molybdopterin-guanine dinucleotide biosynthesis protein A
13_1_40cm_4_scaffold_4071_12
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

11309..12538
DNA (1230bp) protein (410aa)
thiI; thiamine biosynthesis protein thiI Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
Probable tRNA sulfurtransferase id=4621862 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
thiI; thiamine biosynthesis protein thiI
13_1_40cm_4_scaffold_4071_13
bacterium YEK0313, Bacteria

Not on your lists

12662..13951
DNA (1290bp) protein (430aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00037E66A0
Esterase EstB {ECO:0000313|EMBL:CEJ15156.1}; Flags: Precursor;; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
beta-lactamase
13_1_40cm_4_scaffold_4071_14
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

14076..14546
DNA (471bp) protein (157aa)
RpiB/LacA/LacB family sugar-phosphate isomerase (EC:5.3.1.6); K01808 ribose 5-phosphate isomerase B [EC:5.3.1.6] Tax=GWA2_Rokubacteria_73_35_curated
Sugar-phosphate isomerase, RpiB/LacA/LacB family id=4621857 bin=GWA2_Methylomirabilis_73_35 species=Clostridium thermocellum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ribose 5-phosphate isomerase B
13_1_40cm_4_scaffold_4071_15
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

14530..15777
DNA (1248bp) protein (416aa)
glyA; Serine hydroxymethyltransferase (glyA) (EC:2.1.2.1) Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
glyA; serine hydroxymethyltransferase (EC:2.1.2.1)
Serine hydroxymethyltransferase id=4621854 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_4_scaffold_4071_16
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

15794..16300
DNA (507bp) protein (169aa)
nrdR; transcriptional regulator NrdR; K07738 transcriptional repressor NrdR Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
Transcriptional repressor NrdR id=3366426 bin=GWC2_Methylomirabilis_70_24 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
nrdR; NrdR family transcriptional regulator
13_1_40cm_4_scaffold_4071_17
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

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16659..18476
DNA (1818bp) protein (606aa)
cobalamin B12-binding/Radical SAM family protein id=14627517 bin=bin7_NC10_sister species=Leptospirillum ferriphilum genus=Leptospirillum taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=bin7_NC10_sister organism_group=NC10
cobalamin B12-binding/Radical SAM family protein Tax=CSP1_6_Rokubacteria
cobalamin B12-binding/Radical SAM family
Displaying 17 items

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