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13_1_40cm_4_scaffold_41703

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_41703_1
R_Rokubacteria_71_18, Rokubacteria, Bacteria

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comp(130..483)
DNA (354bp) protein (118aa)
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
13_1_40cm_4_scaffold_41703_2
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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comp(480..1202)
DNA (723bp) protein (241aa)
DtxR family iron dependent repressor; K03709 DtxR family transcriptional regulator, Mn-dependent transcriptional regulator Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
iron dependent repressor; K03709 DtxR family transcriptional regulator, Mn-dependent transcriptional regulator id=14625222 bin=bin7_NC10_sister species=unknown genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
iron dependent repressor
13_1_40cm_4_scaffold_41703_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

1273..3282
DNA (2010bp) protein (670aa)
ligA; DNA ligase (Polydeoxyribonucleotide synthase [NAD+]) (EC:6.5.1.2) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
ligA; DNA ligase (Polydeoxyribonucleotide synthase [NAD+]) (EC:6.5.1.2) id=14430884 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
ligA; DNA ligase (Polydeoxyribonucleotide synthase [NAD+]) (EC:6.5.1.2)
13_1_40cm_4_scaffold_41703_4
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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3279..4301
DNA (1023bp) protein (341aa)
Kelch repeat-containing protein id=3960133 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Kelch repeat-containing protein Tax=GWA2_Rokubacteria_73_35_curated
Kelch repeat-containing protein
13_1_40cm_4_scaffold_41703_5
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

4298..4945
DNA (648bp) protein (216aa)
Tetratricopeptide TPR_2 id=3960130 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
hypothetical protein
13_1_40cm_4_scaffold_41703_6
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

4945..5628
DNA (684bp) protein (228aa)
putative transferase protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Probable transferase protein id=4424806 bin=GWC2_Methylomirabilis_70_24 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
putative transferase protein
13_1_40cm_4_scaffold_41703_7
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

5639..6472
DNA (834bp) protein (278aa)
alpha/beta hydrolase fold protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Alpha/beta hydrolase fold protein id=3960128 bin=GWA2_Methylomirabilis_73_35 species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
alpha/beta hydrolase fold protein
13_1_40cm_4_scaffold_41703_8
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

6469..6903
DNA (435bp) protein (145aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
GCN5-related N-acetyltransferase id=3960125 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Geobacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Displaying 8 items

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