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13_1_40cm_4_scaffold_42268

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_42268_1
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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comp(3..683)
DNA (681bp) protein (227aa)
class I fumarate hydratase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative Tartrate dehydratase beta subunit id=1746139 bin=GWA2_Methylomirabilis_73_35 species=alpha proteobacterium BAL199 genus=unknown taxon_order=unknown taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
class I fumarate hydratase
13_1_40cm_4_scaffold_42268_2
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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comp(991..1929)
DNA (939bp) protein (313aa)
tartrate/fumarate subfamily Fe-S type hydro-lyase subunit alpha; K03779 L(+)-tartrate dehydratase alpha subunit [EC:4.2.1.32] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Fumarase alpha subunit id=1746141 bin=GWA2_Methylomirabilis_73_35 species=Verminephrobacter eiseniae genus=Verminephrobacter taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
tartrate/fumarate subfamily Fe-S type hydro-lyase subunit alpha
13_1_40cm_4_scaffold_42268_3
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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comp(1945..3189)
DNA (1245bp) protein (415aa)
sugar phosphate permease Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Sugar phosphate permease id=3708852 bin=GWA2_Methylomirabilis_73_35 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
sugar phosphate permease
13_1_40cm_4_scaffold_42268_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(3186..3470)
DNA (285bp) protein (95aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative uncharacterized protein id=1746143 bin=GWA2_Methylomirabilis_73_35 species=Sagittula stellata genus=Sagittula taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_40cm_4_scaffold_42268_5
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(3492..3809)
DNA (318bp) protein (106aa)
id=4895587 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
id=14626788 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
13_1_40cm_4_scaffold_42268_6
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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comp(3831..4085)
DNA (255bp) protein (85aa)
arsR; putative arsenical resistance operon repressor Tax=GWC2_Rokubacteria_70_16_curated
Putative transcriptional regulator, ArsR family protein id=4759445 bin=GWC2_Methylomirabilis_70_16 species=Cupriavidus sp. HPC(L) genus=Cupriavidus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
ArsR family transcriptional regulator
13_1_40cm_4_scaffold_42268_7
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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comp(4287..4523)
DNA (237bp) protein (79aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Uncharacterized protein id=1746145 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
toluene tolerance Ttg2 superfamily protein
13_1_40cm_4_scaffold_42268_8
unknown

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4990..5436
DNA (447bp) protein (149aa)

This feature has no annotations

13_1_40cm_4_scaffold_42268_9
Leishmania mexicana, Leishmania, Kinetoplastida, Eukaryota

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comp(5248..5964)
DNA (717bp) protein (239aa)
WGS CADB00000000 data, contig 91 (Fragment) n=1 Tax=Leishmania mexicana (strain MHOM/GT/2001/U1103) RepID=E8NHR5_LEIMU
hypothetical protein
WGS CADB00000000 data, contig 91 {ECO:0000313|EMBL:CBZ41040.1}; Flags: Fragment;; TaxID=929439 species="Eukaryota; Euglenozoa; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leishmania.;" source="Le
Displaying 9 items

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